Gene Dret_2158 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDret_2158 
Symbol 
ID8420009 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfohalobium retbaense DSM 5692 
KingdomBacteria 
Replicon accessionNC_013223 
Strand
Start bp2453417 
End bp2454565 
Gene Length1149 bp 
Protein Length382 aa 
Translation table11 
GC content56% 
IMG OID645038752 
ProductPeptidase M23 
Protein accessionYP_003199020 
Protein GI258406278 
COG category[D] Cell cycle control, cell division, chromosome partitioning 
COG ID[COG4942] Membrane-bound metallopeptidase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones37 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.284453 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGAGATA CCCTTGTGCT GAACAACCCT CTTTTGCGCT GCGCCTTTTT GGTCCTTGTG 
GTCCTGCTGG GATATTGGGG AACGGCTCTG CCCCCAGGAC CAGCTTGCGC CCAAAGCCCG
GCCCGCAGCC TTGAAAAAGA CCTCTCTCAA ACCAGAAACA AAGCCCAGAA GCACCGCAAA
GCCCTGCAAA GTCTGACGGC CAAGGAACGT CGCCTGTACA CCGATCTGGC CCAAACCGAA
AAACGGATCC AGAAACTTCG CGACCGGCTG TCTCAACAAC AAAAGCGCCT GGAAACACTT
CGCAAACAGC AGCGTCGCCT GAGCCAGGAG ACCAAAGGAC TGCAGGCCAG ACAACAGGCC
CAGGAACAGG CCCTGCAAAA GGTCCTGCGG GAATTGTGGC CGCTACACCT GGCCCGAAAA
TACGGTGGGG GAATGCAGAC GGATTCCTGG GCCGAAGCCG ACCGCCATCT GACGTGGTTG
AAAACGTATT ATGACCAGGC TGAAGTCCAC CTCATGCAGT TGCAGCGCCG GGCAAAGGCC
ATCGCCGCCA AAACCGAGGA ACACGAAGCA TTGGTCCAAA AGACACAATC CACTGTCGCC
GAGTTGACCC AAACCCGCGA ACGCCTTGTT GAGGACCGTT TGACATATCT CAACCGCGTA
CGCTCCATCC GCTCACAACG GCTGGCCAAA GAGGACCAGC TGGCCGCGAT CCAGGAAACC
ATCGATTCGT TGCAATACAG GCTCAAAAGC CTCAAATCCA AAAATTTCAA AGACCAGAAA
GGATATCTCC CCTGGCCAGC ACGGGGATCC GTGGTCCAGG AATTCGCCCC CGCCGCCGAC
CAACCGCACC GCGGGATCGG GCTGAAGGTT TCCTCCTCTA CCGTCAAAGC GGTCAGTTGG
GGCAAGGTGG TCCACAACGA CCAATTGCGC GGATTCGGCC ATGTGGTTAT TCTTCTGCAC
CAGGGAGGAT ATTACTCCTT GTATGCCTTC CTGGCCCAAA GCGATGTGCG AATGGGGCAA
CAGGTTGAAA AAGGGGAGAT TATCGGCAAA CCCGGCTACT ACCCCCAAGC CGACGCCACC
GGATTGTATT TCGAATTGCG TTTTGGCCAG AAAGCCATTA ATCCTGAGGT ATGGCTTGTA
TCCCGGTGA
 
Protein sequence
MRDTLVLNNP LLRCAFLVLV VLLGYWGTAL PPGPACAQSP ARSLEKDLSQ TRNKAQKHRK 
ALQSLTAKER RLYTDLAQTE KRIQKLRDRL SQQQKRLETL RKQQRRLSQE TKGLQARQQA
QEQALQKVLR ELWPLHLARK YGGGMQTDSW AEADRHLTWL KTYYDQAEVH LMQLQRRAKA
IAAKTEEHEA LVQKTQSTVA ELTQTRERLV EDRLTYLNRV RSIRSQRLAK EDQLAAIQET
IDSLQYRLKS LKSKNFKDQK GYLPWPARGS VVQEFAPAAD QPHRGIGLKV SSSTVKAVSW
GKVVHNDQLR GFGHVVILLH QGGYYSLYAF LAQSDVRMGQ QVEKGEIIGK PGYYPQADAT
GLYFELRFGQ KAINPEVWLV SR