Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dret_2158 |
Symbol | |
ID | 8420009 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfohalobium retbaense DSM 5692 |
Kingdom | Bacteria |
Replicon accession | NC_013223 |
Strand | + |
Start bp | 2453417 |
End bp | 2454565 |
Gene Length | 1149 bp |
Protein Length | 382 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 645038752 |
Product | Peptidase M23 |
Protein accession | YP_003199020 |
Protein GI | 258406278 |
COG category | [D] Cell cycle control, cell division, chromosome partitioning |
COG ID | [COG4942] Membrane-bound metallopeptidase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 37 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 0.284453 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGAGATA CCCTTGTGCT GAACAACCCT CTTTTGCGCT GCGCCTTTTT GGTCCTTGTG GTCCTGCTGG GATATTGGGG AACGGCTCTG CCCCCAGGAC CAGCTTGCGC CCAAAGCCCG GCCCGCAGCC TTGAAAAAGA CCTCTCTCAA ACCAGAAACA AAGCCCAGAA GCACCGCAAA GCCCTGCAAA GTCTGACGGC CAAGGAACGT CGCCTGTACA CCGATCTGGC CCAAACCGAA AAACGGATCC AGAAACTTCG CGACCGGCTG TCTCAACAAC AAAAGCGCCT GGAAACACTT CGCAAACAGC AGCGTCGCCT GAGCCAGGAG ACCAAAGGAC TGCAGGCCAG ACAACAGGCC CAGGAACAGG CCCTGCAAAA GGTCCTGCGG GAATTGTGGC CGCTACACCT GGCCCGAAAA TACGGTGGGG GAATGCAGAC GGATTCCTGG GCCGAAGCCG ACCGCCATCT GACGTGGTTG AAAACGTATT ATGACCAGGC TGAAGTCCAC CTCATGCAGT TGCAGCGCCG GGCAAAGGCC ATCGCCGCCA AAACCGAGGA ACACGAAGCA TTGGTCCAAA AGACACAATC CACTGTCGCC GAGTTGACCC AAACCCGCGA ACGCCTTGTT GAGGACCGTT TGACATATCT CAACCGCGTA CGCTCCATCC GCTCACAACG GCTGGCCAAA GAGGACCAGC TGGCCGCGAT CCAGGAAACC ATCGATTCGT TGCAATACAG GCTCAAAAGC CTCAAATCCA AAAATTTCAA AGACCAGAAA GGATATCTCC CCTGGCCAGC ACGGGGATCC GTGGTCCAGG AATTCGCCCC CGCCGCCGAC CAACCGCACC GCGGGATCGG GCTGAAGGTT TCCTCCTCTA CCGTCAAAGC GGTCAGTTGG GGCAAGGTGG TCCACAACGA CCAATTGCGC GGATTCGGCC ATGTGGTTAT TCTTCTGCAC CAGGGAGGAT ATTACTCCTT GTATGCCTTC CTGGCCCAAA GCGATGTGCG AATGGGGCAA CAGGTTGAAA AAGGGGAGAT TATCGGCAAA CCCGGCTACT ACCCCCAAGC CGACGCCACC GGATTGTATT TCGAATTGCG TTTTGGCCAG AAAGCCATTA ATCCTGAGGT ATGGCTTGTA TCCCGGTGA
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Protein sequence | MRDTLVLNNP LLRCAFLVLV VLLGYWGTAL PPGPACAQSP ARSLEKDLSQ TRNKAQKHRK ALQSLTAKER RLYTDLAQTE KRIQKLRDRL SQQQKRLETL RKQQRRLSQE TKGLQARQQA QEQALQKVLR ELWPLHLARK YGGGMQTDSW AEADRHLTWL KTYYDQAEVH LMQLQRRAKA IAAKTEEHEA LVQKTQSTVA ELTQTRERLV EDRLTYLNRV RSIRSQRLAK EDQLAAIQET IDSLQYRLKS LKSKNFKDQK GYLPWPARGS VVQEFAPAAD QPHRGIGLKV SSSTVKAVSW GKVVHNDQLR GFGHVVILLH QGGYYSLYAF LAQSDVRMGQ QVEKGEIIGK PGYYPQADAT GLYFELRFGQ KAINPEVWLV SR
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