| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dret_2132 |
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| Symbol | |
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| ID | 8419982 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfohalobium retbaense DSM 5692 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013223 |
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| Strand | + |
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| Start bp | 2429093 |
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| End bp | 2431078 |
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| Gene Length | 1986 bp |
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| Protein Length | 661 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 645038725 |
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| Product | acetate/CoA ligase |
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| Protein accession | YP_003198994 |
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| Protein GI | 258406252 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG0365] Acyl-coenzyme A synthetases/AMP-(fatty) acid ligases |
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| TIGRFAM ID | [TIGR02188] acetate--CoA ligase |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.00000882017 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 0.24992 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGGTGGCT CAGACGAACA CATTGAGAGC ATGATGCACG AAAGGCGGCA CTTTCCACCG
CCACGCCACG GCAGCGAACG GGCCCACATC CCGGGCCCGG AGGCCTATGA TGACCTGCGC
GACCAGGCAG CCAGGGATCC GGAGGGGTTC TGGGCCGAAC GAGCCAAAGC GTTATTGGAT
TGGGACAGTG AATGGGACAC GGTCCTCGAG GCAGATTGGG AGACACCGGA ATTCAAATGG
TTCGCTGGCG GCAAACTCAA CGCCTGCGCC AATTGCCTGG ACCGCCACGT CGCCAGCGGC
CGAGGGGAAA AGACCGCACT GATCTGGCAG GGGGAGCCGG AAGACGACGT GCGGCAGTTC
ACCTACGCTG AATTGCGCGA TGAAGTGGTC AAATTCGCCA AGGTCCTCAA AAAATGGGGC
GTGGGCAAAG GGGACCGGGT CGCCGTCTAT CTGCCCATGA TCCCGGAGTT GCCCATCGCC
ATGCTCGCTT GCGCCCGCAT CGGCGCCGTG CACTCGGTGG TTTTTGCCGG GTTCTCGGCC
CACAGCCTGC AAAACCGCAT CCAGGACTGC GAGGCCAAGG TCCTGATTAC CGCTGACGCG
GTCATCCGGG CCGGCAAGCA GATTCCCTTG AAGACCAACG GGGACGAGGC CCTGGAAGCC
TGCCCATCGG TGGAGCATTG CATCGTGGTC AACCGGGCCG GACTGGACGT CGCCATGCAC
GAGGGGCGAG ACGTCTGGTG GCACGACGCC GTGGCCGGCG ACGACGGAAC GGACTGCCCG
CCGGAATCCA TGGACGCCGA GGATCTGCTG TTCATCCTCT ACACCAGCGG CTCGACCGGC
AAACCCAAAG GGGTCGTGCA CACCACGGGT GGCTATCTGA CTTATACGGC CCAGACCACC
CAATGGGTCT TTGATATCCA GGAGGACGAC GTCTATTGGT GCACCGCGGA CATCGGCTGG
ATCACCGGCC ACTCTTACAT CCTCTACGGC CCGCTGGCCC TGGGCGCGAC CACGGTCATG
TTCGAGGGCG TGCCCTCCTA TCCGCAGCCG GACCGGTTCT GGCAGGTGGT CGAGAAATTC
AAGGTGACAA TTTTTTACAC CGCCCCCACG GTCATCCGAG CCCTGATGCG TGAAGGGCCT
CAATGGACCG AAACCCGGGA TCTTTCCTCC CTGCGGCTGC TCGGCTCCGT GGGCGAGCCC
ATCAATCCCG AGGCCTGGAT GTGGTACCAC GACCACGTCG GCAAGGGGGA ATTGCCGGTG
CTGGATACCT GGTGGCAGAC CGAAACCGGC GGGATCATGA TCTCGGCTGT GCCTTACGCC
ACGACGCTGA AACCGGGATC AGCCAGCCAG CCGCTGCCGG GCATCGAAGC CGATATCGTC
GATCGCGACG GAGAACCGGT GGGACCGAAC CGCGGGGGGC ATCTGGTGGT CAAGACACCG
TGGCCCGGGA TGCTCCGCAA CGTATACGGC GATCCGGCCC GCTACAAATC GACCTATTTT
GAACGCTTTC CTGGGATGTA CGAATCCGGG GACTCGGCCC GCATGGATGA GGAAGGGTAT
TTCTGGATCA TGGGTCGGCT GGACGACGTC ATCAATGTCT CCGGGCACCG TCTGGGCACC
GCGGAGATCG AATCCGCCCT GGTGGCCCAC GAAGCCGTGG CCGAAGCCGC GGTGGTCGGC
ATGCCCCATG AGGTCAAGGG CCAGGCTATC TACGCTTACG TGACCCTGAA GTCGACCTTC
CAGGAAAACG ATGAGTTGCG CAAGGTCCTG CGCCAGCACG TGCGCACCGA GATCGGGGCC
ATCGCCACGC CGGAGATCAT CCAGTTCGCG CCCGGCCTGC CCAAGACCCG CTCGGGGAAG
ATCATGCGCC GTATCCTGCG CAAGATCGCC GCGGACGAGA CCAACGCCTT CGGCGACACC
TCGACCCTGG CCGATCCCAC GGTTATTGCC GACTTGATAG ATGGTAAGAA TTTGTTGGGG
AAATAA
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| Protein sequence | MGGSDEHIES MMHERRHFPP PRHGSERAHI PGPEAYDDLR DQAARDPEGF WAERAKALLD
WDSEWDTVLE ADWETPEFKW FAGGKLNACA NCLDRHVASG RGEKTALIWQ GEPEDDVRQF
TYAELRDEVV KFAKVLKKWG VGKGDRVAVY LPMIPELPIA MLACARIGAV HSVVFAGFSA
HSLQNRIQDC EAKVLITADA VIRAGKQIPL KTNGDEALEA CPSVEHCIVV NRAGLDVAMH
EGRDVWWHDA VAGDDGTDCP PESMDAEDLL FILYTSGSTG KPKGVVHTTG GYLTYTAQTT
QWVFDIQEDD VYWCTADIGW ITGHSYILYG PLALGATTVM FEGVPSYPQP DRFWQVVEKF
KVTIFYTAPT VIRALMREGP QWTETRDLSS LRLLGSVGEP INPEAWMWYH DHVGKGELPV
LDTWWQTETG GIMISAVPYA TTLKPGSASQ PLPGIEADIV DRDGEPVGPN RGGHLVVKTP
WPGMLRNVYG DPARYKSTYF ERFPGMYESG DSARMDEEGY FWIMGRLDDV INVSGHRLGT
AEIESALVAH EAVAEAAVVG MPHEVKGQAI YAYVTLKSTF QENDELRKVL RQHVRTEIGA
IATPEIIQFA PGLPKTRSGK IMRRILRKIA ADETNAFGDT STLADPTVIA DLIDGKNLLG
K
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