| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dret_2112 |
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| Symbol | |
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| ID | 8419962 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfohalobium retbaense DSM 5692 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013223 |
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| Strand | - |
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| Start bp | 2402248 |
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| End bp | 2403525 |
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| Gene Length | 1278 bp |
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| Protein Length | 425 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 645038705 |
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| Product | ribonuclease BN |
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| Protein accession | YP_003198974 |
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| Protein GI | 258406232 |
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| COG category | [S] Function unknown |
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| COG ID | [COG1295] Predicted membrane protein |
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| TIGRFAM ID | [TIGR00765] YihY family protein (not ribonuclease BN) |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.181145 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 0.117227 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTGGAAAA GATATGCCAA TATCCGTGTC GGCAACGCGT TCAGGATGAT TCGGGACTGG
GTCCTGTTCG TCCTGCGGGC TTTTGTCCGC GATCAATGTC TGCTCCGGGC TTCGGCATTG
ACGTATGTCT CTGCTCTGGC CCTGGTCCCG TTTCTGGCAG TGGCGTTTTC ATTGTCCAAA
GGGTTCGGGT TCCAGAATAC GCTGTATATA CGCACGCTCC TGGAACGGTT CGCCGCCGGA
CGAGAGCAGG TCATCGAACA CGTTTTGGCC TATATCAACA ATACCGACGT GGCCACTTTG
GGGTCTATCG GTGTCGGGGT CCTGTTCGTC TCTGTCTTTT CCATGCTGGC CACAGTCGAA
AAGACGTTCA ATACTATCTG GGGTGTCCAG CGCCCCCGGC AATTGAGTCG CAAATTTACC
GACTATCTCA GTGTCACCCT GCTTTGTCCG GTCCTGGTCA TCGCTTCCAT CAGTATAACC
GCTTCGCTGC AAAGCTCGGC CGTGGCCCAA AAGCTTTTGC GGGTGGGGTT TTTCAATTCG
GTTTATGGGG GGCTGCTCAG CCTGGCCCCG TTCTTCATGG CCTGGCTGGC CCTGATCTTT
ATCTATACGG TCATGCCCAA TACCAGGGTA CGTTTCCTCC CGGCGCTGGG CGGCGGGCTG
GTCGCCGGCT TTTTATGGCA GGCAACCCAG AAACTGCTCA TCCATTACCA GATCGGATTC
AGCAAATATA ACGCGATTTA TGGAAGCTTC GCCCAAGTGC CCTTGCTGTT GGTCTGGATG
TATCTGAGTT GGATCATTGT TCTTTTTGGC GCAGAAATCA GTTTTGCCCT CCAAAACAGA
AACACTGTGC TGCGCCAGGA GATGTGGGGG GCATTTGAAC TCCGGCGCAA GCAGACCCTG
GCCCTTGCTG TCGCGGCTTT GTTGGCCCGC AGCGTCGTCG AGGGGCACAG GCCACTGACA
TTGGAGCAAT TGAGCCAGGC TACGGATACC TCGGTTCGGC AGGTAGGCGC TGTCCTTGAA
GTCCTTGAAC CTTCCGGGAT TGTGGCCCGG GTGGTGACAG AGGACGAGGG GCTGGCGTAT
AGTCTGCTGG TCTGCCCGGA TCGAGTCCGT GCCGCTGAGA TTCTGGACCG CTTCGAGGCC
TCCCCGGAAA TCCCCGCTGA AGGAAGTGAT ACCGGGCAAT GGGCGGTTGC GTGGCTGGAG
CGGCTCCATG CGGCCCGCCG GGCGAGCGAG GCCAATGTCC TGCTCAGTGA TCTGGCCCAG
CAAGTTCCCC GTATTTGA
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| Protein sequence | MWKRYANIRV GNAFRMIRDW VLFVLRAFVR DQCLLRASAL TYVSALALVP FLAVAFSLSK
GFGFQNTLYI RTLLERFAAG REQVIEHVLA YINNTDVATL GSIGVGVLFV SVFSMLATVE
KTFNTIWGVQ RPRQLSRKFT DYLSVTLLCP VLVIASISIT ASLQSSAVAQ KLLRVGFFNS
VYGGLLSLAP FFMAWLALIF IYTVMPNTRV RFLPALGGGL VAGFLWQATQ KLLIHYQIGF
SKYNAIYGSF AQVPLLLVWM YLSWIIVLFG AEISFALQNR NTVLRQEMWG AFELRRKQTL
ALAVAALLAR SVVEGHRPLT LEQLSQATDT SVRQVGAVLE VLEPSGIVAR VVTEDEGLAY
SLLVCPDRVR AAEILDRFEA SPEIPAEGSD TGQWAVAWLE RLHAARRASE ANVLLSDLAQ
QVPRI
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