Gene Dret_2106 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDret_2106 
Symbol 
ID8419956 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfohalobium retbaense DSM 5692 
KingdomBacteria 
Replicon accessionNC_013223 
Strand
Start bp2396533 
End bp2396976 
Gene Length444 bp 
Protein Length147 aa 
Translation table11 
GC content59% 
IMG OID645038699 
Productprotein of unknown function DUF606 
Protein accessionYP_003198968 
Protein GI258406226 
COG category[S] Function unknown 
COG ID[COG3238] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones42 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.0923123 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAATGGG TTTTCATTCT TGTCGTCTTA TTCGCCGGGG CTATGGCCCC GACCCAGGCC 
GGAATCAACG CCGGCTTGAG CGGCTATTTG AACAGCAATG TCCTGGCCGC CCTGGTGTCG
TTTCTTGTCG GTTCGCTGGC CTTGTTTGTA TATGCCGTGG TCCTCAGAAT CCCCTGGCCG
GGAGGGCAGG CCCTGCAAGC GGCTCCCTGG TGGGTCTGGA CCGGCGGTTT TTGCGGGGCG
TATCTGGTAA CCGCCACCGT GGCGGCTGTC CCGGTCCTCG GCGCCGCGAC CATGATCGGC
GTATTTGTCG CCGGGCAGAT GGGGACGTCT TTGCTTCTGG ACCATTTCGG GCTTGTGGGC
TACCCGGTCC AGCCAATAAG CGTCTGGCGT ATCGTGGGAA TCGTTTGTAT CGTTGTCGGT
GTTTTGTTGA TTAAACGGTT TTGA
 
Protein sequence
MEWVFILVVL FAGAMAPTQA GINAGLSGYL NSNVLAALVS FLVGSLALFV YAVVLRIPWP 
GGQALQAAPW WVWTGGFCGA YLVTATVAAV PVLGAATMIG VFVAGQMGTS LLLDHFGLVG
YPVQPISVWR IVGIVCIVVG VLLIKRF