| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dret_2095 |
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| Symbol | |
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| ID | 8419945 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfohalobium retbaense DSM 5692 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013223 |
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| Strand | - |
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| Start bp | 2384042 |
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| End bp | 2385751 |
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| Gene Length | 1710 bp |
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| Protein Length | 569 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 645038688 |
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| Product | ABC-type sugar transport system, periplasmic component |
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| Protein accession | YP_003198957 |
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| Protein GI | 258406215 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1653] ABC-type sugar transport system, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 0.105917 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGTATGCA AACGTCGGGT GGGTTTGGCC GTTCAACTGG TCATTGCCCT AGCTTTGTTG
GTCCCCGCCT CCGCAGGGGC CCAGGATACC ATTGGAAAGT GGGTCGACGT CTTTCAACCC
TCGGTGCTGA ACCAAAAGCA GCAACGCCAG GAATTGGAAT GGTTCAAACA GGCGGCCGAG
CCGATGCAGG GCCTGGAAAT CAAATCCGTG GCCGAAGGCA TCACCACCCA TAAATGGGAG
GCCAAGGTCT TGGCCCAGGC CTTTTATGAA ATCACCGGCA TCAAGGTCAC CCATGACATC
ATTGGCGAAG GTGAGGTTGT CGACCGGGTC CAGCGCCAGA TCCAGACCCA ACGGAAGATT
TACGATATCT ACGTCAACGA TGCTGATTTG ATCGGTACCC ATCTCCGCCT CGACAGTGCC
CTGAACCTCA GCGACTACAT GAAAGGTGAA GGCGCTGAGG TCACTAACCC CATGCTGGAT
CTGGACGATT TCCTGAACCC GGAATTCGGC CAGGATTATG ACGGCAACCA ACTCCAATTG
CCGGACCAGC AATTCGCCAA CCTGTATTGG TTTCGCTACG ACTGGTTCAC CGACCCGAAG
TACAAAAAAG AGTTCCAGGA TGAATACGGC TATGAACTCG GCGTGCCCGT GAACTGGGCT
GCCTATGAGG ACATTGCCGA GTTCTTCACC GGCAAGACCA TCGATGGACA GACCGTGTAT
GGCCATATGG ATTATGGCAA GAAATCCCCG TCTTTGGGCT GGCGGTTTAC CGACGCTTGG
CTGTCTATTG CCGGTGTCGG AGATAAAGGG CTGCCCAACG GGTACCCCGT GGATGAATGG
GGCATCCGGG TCGACGGCAA AACCCCTGTG GGGGCCAGTG TTGAGCGTGG TGGTGCGGCC
AATAGTCCGG CCGCGGTCTA CGCGACGACC AAGTATGTCG AATGGCTCAA GAAGTACGCT
CCCCCCTACG CCGCTTCCAT GACCTGGTCT GAAGCAGGGC CAACCCCTGC CCGCGGCAAT
GTGGCGCAGC GGGTTTTCCA GTACATCACC TGGCTCTCCG ACCCGGCCTT CAATTCACCG
GACAGCCCGG TCACAGACGC TACCGGCAAG CCGGTCTGGC GTGTGGCCCC GACACCGCAC
GGCAAATACT GGGATGAAGG AATGAAGGTT GGCTATCAGG ATGCCGGCAG TTGGACGATC
CTGAAGGACA GTGTGACAGG AAAGTACCGC AAGGCCGCTT GGCTGTGGGC CCAATTCTGC
GTGTCCAAGT CGGTGTGTCT GAAGAAATTC CTCGTGGGTC GCACCCCCAT CCGGAAATCC
ACGGTTTTTT CCGATTACCT GGCCAAGGAA GAGGAAAAAG GGACGTACGG CGGAATCGTG
ACCTTCTACA AGTCCCCGGT GGAGCATATG TGGACCGACT CCGGGCCGAA TGTGCCCCAT
TATCCGCTTC TGGCCGAGCA GTGGTGGAAA AATGTCGCCC TGGCCGTTAC CGGTGAAGCC
ACACCCCAGG AAGCGATGGA CAGTTTGGCC TATAAAATGG ACGACCTGAT GGGGAAAATG
CGGCTCAACC AGTATTCTCC GAAACTCAAT CCCAAAAAGT CCCGGGAATA TTGGCTTTCC
CAGCCCGGCT CACCCAAGCC GGTCCGCTCC GAAGAAGAGC CGGAAACCAT GCCCTATGAC
GAAATGCTGA AGAAATGGAA GAACCAATAG
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| Protein sequence | MVCKRRVGLA VQLVIALALL VPASAGAQDT IGKWVDVFQP SVLNQKQQRQ ELEWFKQAAE
PMQGLEIKSV AEGITTHKWE AKVLAQAFYE ITGIKVTHDI IGEGEVVDRV QRQIQTQRKI
YDIYVNDADL IGTHLRLDSA LNLSDYMKGE GAEVTNPMLD LDDFLNPEFG QDYDGNQLQL
PDQQFANLYW FRYDWFTDPK YKKEFQDEYG YELGVPVNWA AYEDIAEFFT GKTIDGQTVY
GHMDYGKKSP SLGWRFTDAW LSIAGVGDKG LPNGYPVDEW GIRVDGKTPV GASVERGGAA
NSPAAVYATT KYVEWLKKYA PPYAASMTWS EAGPTPARGN VAQRVFQYIT WLSDPAFNSP
DSPVTDATGK PVWRVAPTPH GKYWDEGMKV GYQDAGSWTI LKDSVTGKYR KAAWLWAQFC
VSKSVCLKKF LVGRTPIRKS TVFSDYLAKE EEKGTYGGIV TFYKSPVEHM WTDSGPNVPH
YPLLAEQWWK NVALAVTGEA TPQEAMDSLA YKMDDLMGKM RLNQYSPKLN PKKSREYWLS
QPGSPKPVRS EEEPETMPYD EMLKKWKNQ
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