Gene Dret_2086 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDret_2086 
Symbol 
ID8419936 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfohalobium retbaense DSM 5692 
KingdomBacteria 
Replicon accessionNC_013223 
Strand
Start bp2375606 
End bp2375926 
Gene Length321 bp 
Protein Length106 aa 
Translation table11 
GC content59% 
IMG OID645038679 
ProductATP synthase F0, C subunit 
Protein accessionYP_003198948 
Protein GI258406206 
COG category 
COG ID 
TIGRFAM ID[TIGR01260] ATP synthase, F0 subunit c 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00000184566 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value0.895772 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGTAAAT TTCTCCTGAC CGCTCTGAAC ACGGTTGCTT TGGTTGCCAT CGCCGGCGCT 
GCTTTCGCAG CAGAAGCTAC TCCGGAAGTT ATTTCCATGA CTTCCATGGC CACCGCCATT
GGTATGGCTA TCGCCGCCGC CGGTTGCGGT GTTGCCCAGG GCCTTGGCCT GAAGGCCGCT
TGTGAAGGAA CCGCCCGCAA CCCCGAAGCT AGCGGGAAGA TCACTGTGAC CATGCTGGTC
GGCTTGGCCA TGATCGAGTC CTTGGCGATT TACGCCCTGG TCGTGAACTT GATCCTGCTC
TTCGCCAACC CCTTCCTGTA G
 
Protein sequence
MRKFLLTALN TVALVAIAGA AFAAEATPEV ISMTSMATAI GMAIAAAGCG VAQGLGLKAA 
CEGTARNPEA SGKITVTMLV GLAMIESLAI YALVVNLILL FANPFL