| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dret_2081 |
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| Symbol | lpxC |
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| ID | 8419931 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfohalobium retbaense DSM 5692 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013223 |
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| Strand | - |
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| Start bp | 2371357 |
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| End bp | 2372277 |
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| Gene Length | 921 bp |
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| Protein Length | 306 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 645038674 |
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| Product | UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase |
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| Protein accession | YP_003198943 |
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| Protein GI | 258406201 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0774] UDP-3-O-acyl-N-acetylglucosamine deacetylase |
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| TIGRFAM ID | [TIGR00325] UDP-3-0-acyl N-acetylglucosamine deacetylase |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.0248652 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGCAACAAC ATACAATCGA AAAGGCAGTC AGCTGTACCG GCATTGGCTT GCACAGTGGG
CGACGGGTTT CTCTGCGGCT CAATCCTGCC GCCGAAGACA CGGGCGTCGT GTTTGCTGTC
AATACCGGAG ATGGAGCACG TTTTTTGAAT CTCCATCCTG ACGCTGTCCA AGGGACAGGG
CTGGCCACCA CCTTGGGACA GGGTGATGTC CGGGTCGCTA CAGTCGAGCA CCTCATGGCC
GCAATTCGGG CCATGGGCAT AGATAATATC CTGGTTGAGG TCGACGGGGG GGAAGTTCCC
ATTATGGATG GCAGTGCCGC TTCCTTCGTC ATGCTCTTGC GTGACGCTGG GCTGCGCCAG
CAACGCAAGC CACAGAAAAT CTGGGCCGTC AAACGCCGCG TCAGTGTGGA AGAGGACGGC
CGGTGGATTG TGGGCGAGCC CTTTCCCGGA TTTTGTGTCG ACTACACCAT TGATTTTGAT
CATCCGCTTG TCGGGGTCCA AACCCGGCGT TTTCATCTTG CCCCAGAGGA TTTTGAGCGT
TCCGTGGCCC GGGCCCGGAC CTTCGGGTTC TTGCATGAGG TCGAGAAGTT GCAAAAGCAC
AACTTGGCCC TGGGCGGGTC GCTGGACAAC GCCATTGTCT TGGACGAGTA TGGGGTTGTA
AATCCGGAGG GGCTTCGGTT CGTTGACGAG TTCGTTCGCC ACAAGATTCT GGATTTCGTC
GGTGACATGG CGCTTCTCGA CGGCCAATTG TGGGGCAAAT TCACCGTACA TTGTTCCGGA
CACGCTTTGA ATAACGCCTT TTTGCGCCAT ATTTACGAGA ACCGTGCTCA GTGTCTGGAG
CGCTGGGAAG CCAAGCCCCA GACCGAACAG CGACTCCCAG GGAGGGAGTG GCTGGGTCAG
GAAGTCCCCG CCGATATGTA G
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| Protein sequence | MQQHTIEKAV SCTGIGLHSG RRVSLRLNPA AEDTGVVFAV NTGDGARFLN LHPDAVQGTG
LATTLGQGDV RVATVEHLMA AIRAMGIDNI LVEVDGGEVP IMDGSAASFV MLLRDAGLRQ
QRKPQKIWAV KRRVSVEEDG RWIVGEPFPG FCVDYTIDFD HPLVGVQTRR FHLAPEDFER
SVARARTFGF LHEVEKLQKH NLALGGSLDN AIVLDEYGVV NPEGLRFVDE FVRHKILDFV
GDMALLDGQL WGKFTVHCSG HALNNAFLRH IYENRAQCLE RWEAKPQTEQ RLPGREWLGQ
EVPADM
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