Gene Dret_2077 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDret_2077 
Symbol 
ID8419922 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfohalobium retbaense DSM 5692 
KingdomBacteria 
Replicon accessionNC_013223 
Strand
Start bp2368294 
End bp2368833 
Gene Length540 bp 
Protein Length179 aa 
Translation table11 
GC content51% 
IMG OID645038665 
ProductNusG antitermination factor 
Protein accessionYP_003198939 
Protein GI258406197 
COG category[K] Transcription 
COG ID[COG0250] Transcription antiterminator 
TIGRFAM ID[TIGR00922] transcription termination/antitermination factor NusG 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACAGAAG AAAGCGCCCG TTGGTATATC GTCCATGCCT TCTCAGGTTA TGAGCAACGC 
GTGGAGAAAA CCATTGCTGA AATGATCCGA AGTGGACAGG GCGAAGGGCT CATAGAGGAA
GTGATCGTCC CTACTGAAAA AGTAGTGGAG ATGGTCAAAG GTCAGAAGAA AACGTCGACC
CGCAAGTTTT ATCCCGGCTA TGTCCTGGTC AAGATGATCC TCAACGACAA GACCTGGCAC
CTGATCCAGT CGATCCCGAA AGTGACAGGG TTTGTCGGAG GACAGAAGCG GCCGAAGCCC
TTGACGCAAA AGGAAGCGGA CCAAATTCTG CAGACCATCG AGAGCCGCAA AGAGCAGCCG
CGCCCGAAAT TCCATTTCGA ACGTGGCGAT GAAGTTCGCG TGATTGATGG GCCTTTTTCC
GGCTTTAATG GGGAAGTAGA AGAGGTCAAT TACGATAAGG GCAAGCTCAG GGTTTCGGTT
TCCATTTTCG GGCGGCAGAC ACCTGTTGAA CTCGATTTTG TCCAGGTCTC CAAAGGGTAG
 
Protein sequence
MTEESARWYI VHAFSGYEQR VEKTIAEMIR SGQGEGLIEE VIVPTEKVVE MVKGQKKTST 
RKFYPGYVLV KMILNDKTWH LIQSIPKVTG FVGGQKRPKP LTQKEADQIL QTIESRKEQP
RPKFHFERGD EVRVIDGPFS GFNGEVEEVN YDKGKLRVSV SIFGRQTPVE LDFVQVSKG