Gene Dret_2067 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDret_2067 
Symbol 
ID8419912 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfohalobium retbaense DSM 5692 
KingdomBacteria 
Replicon accessionNC_013223 
Strand
Start bp2353218 
End bp2354414 
Gene Length1197 bp 
Protein Length398 aa 
Translation table11 
GC content59% 
IMG OID645038655 
Producttranslation elongation factor Tu 
Protein accessionYP_003198929 
Protein GI258406187 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0050] GTPases - translation elongation factors 
TIGRFAM ID[TIGR00485] translation elongation factor TU
[TIGR00231] small GTP-binding protein domain 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value4.42847e-11 
Plasmid hitchhikingNo 
Plasmid clonabilityunclonable 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.246821 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGCAAGG CGAAATTTGA GCGTTCGAAG CCGCACGTTA ATATCGGCAC GATCGGCCAC 
ATTGACCACG GCAAGACGAC ATTGACGGCG GCGATCACCC GCCAGATCCA TTTGAAGGGC
GGCGTGTCCG ACTATGTGCC TTTCGATCAG ATCGACAAGG CGCCTGAAGA GAAGGAACGC
GGCATCACCA TCGCCACGGC GCACGTGGAG TACGAGACTG GACCCCGGCA CTACGCCCAC
GTGGACTGCC CGGGTCACGC CGACTACATC AAGAACATGA TCACTGGTGC GGCCCAGATG
GACGGCGCGA TCCTGGTTGT CGCCGCTACT GACGGCCCGA TGCCGCAGAC TCGTGAGCAC
ATCCTGCTGG CGCGTCAGGT CGGTGTCCCG AGCCTGGTGG TGTTTTTGAA CAAGGTCGAC
CTGGTTGACG ACGAAGAGCT GTTGGAACTC GTTGAACTGG AAGTGCGTGA GCTGCTTTCG
AGCTACGACT ATCCCGGCGA CGATATTCCG GTCATCTCCG GTAGCGCCTT GAAAGCTCTG
GAAAGCGACG ATCCGAACAG CGAAGATGCC AAGCCGATTT TCGATCTGCT CGACGCTGTG
GATGAGTACG TTGCCGAGCC CGAGCGCGAC ATCGAAAAGC CGTTTTTGAT GCCCATCGAG
GACGTGTTCT CGATCTCCGG CCGCGGAACG GTTGTCACCG GCCGTGTGGA ACGTGGTGTG
ATCAAGGTCG GCGAAGAAGT CGAGATGGTG GGCATGAAGG ATACGACCAA GACGGTCGTC
ACCGGCGTGG AAATGTTCCG CAAGATGTTG GACCAGGGCG AAGCCGGGGA CAATATTGGG
GCGTTGCTGC GTGGTGTGAA GCGCGAAGAT GTTGAGCGCG GCCAGGTTCT GGCACGTCCG
AAATCGATCA CGCCGCACCG CCGTTTCAAG GCCGAAGTCT ACGTATTGAA TAAGGAAGAA
GGCGGCCGCC ACACCCCGTT TTTCTCCGGG TACCGTCCGC AGTTCTATTT CCGGACCACG
GACGTGACCG GTGTGGTGAC CCTGGCCGAA GGCGTTGAGA TGGTCATGCC CGGCGATAAC
GCGACGTTTG ATGTCGAATT GATCGTGCCG ATCGCCATGG AACTGGGACT GCGCTTCGCC
ATCCGCGAAG GCGGCCGTAC AGTGGGCGCC GGCGTTGTAT CCGAAATTGT GGAGTAG
 
Protein sequence
MGKAKFERSK PHVNIGTIGH IDHGKTTLTA AITRQIHLKG GVSDYVPFDQ IDKAPEEKER 
GITIATAHVE YETGPRHYAH VDCPGHADYI KNMITGAAQM DGAILVVAAT DGPMPQTREH
ILLARQVGVP SLVVFLNKVD LVDDEELLEL VELEVRELLS SYDYPGDDIP VISGSALKAL
ESDDPNSEDA KPIFDLLDAV DEYVAEPERD IEKPFLMPIE DVFSISGRGT VVTGRVERGV
IKVGEEVEMV GMKDTTKTVV TGVEMFRKML DQGEAGDNIG ALLRGVKRED VERGQVLARP
KSITPHRRFK AEVYVLNKEE GGRHTPFFSG YRPQFYFRTT DVTGVVTLAE GVEMVMPGDN
ATFDVELIVP IAMELGLRFA IREGGRTVGA GVVSEIVE