Gene Dret_2066 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDret_2066 
SymbolrpsJ 
ID8419911 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfohalobium retbaense DSM 5692 
KingdomBacteria 
Replicon accessionNC_013223 
Strand
Start bp2352895 
End bp2353212 
Gene Length318 bp 
Protein Length105 aa 
Translation table11 
GC content52% 
IMG OID645038654 
Product30S ribosomal protein S10 
Protein accessionYP_003198928 
Protein GI258406186 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0051] Ribosomal protein S10 
TIGRFAM ID[TIGR01049] ribosomal protein S10, bacterial/organelle 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value1.45478e-12 
Plasmid hitchhikingNo 
Plasmid clonabilityunclonable 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.204549 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTTGAAA TGAACAGTGA CCGCATTCGA ATTAAACTCA AGGCCTACGA TTACCGCATT 
TTGGACAAGG CCGTCGCTGA AATCGTGGAT TCGGCAAAGA ATACCGGTGC GAGCATTGCC
GGGCCCATCC CGTTGCCGAC GCGGATACAC AAATACACGG TCAATCGTTC TGTGCACGTG
AACAAGAAAT CCCGCGAACA GTTCGAAATG CGAATCCATA AGCGGTTGTT GGATATCCTT
GAACCGACAC AGCAGACCGT GGACGCCTTG GGGAAATTGA GTCTGCCGGC CGGCGTGGAT
GTGGAAATCA AGCTTTAG
 
Protein sequence
MVEMNSDRIR IKLKAYDYRI LDKAVAEIVD SAKNTGASIA GPIPLPTRIH KYTVNRSVHV 
NKKSREQFEM RIHKRLLDIL EPTQQTVDAL GKLSLPAGVD VEIKL