| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dret_2054 |
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| Symbol | rplX |
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| ID | 8419899 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfohalobium retbaense DSM 5692 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013223 |
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| Strand | - |
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| Start bp | 2347626 |
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| End bp | 2347949 |
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| Gene Length | 324 bp |
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| Protein Length | 107 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 645038642 |
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| Product | 50S ribosomal protein L24 |
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| Protein accession | YP_003198916 |
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| Protein GI | 258406174 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0198] Ribosomal protein L24 |
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| TIGRFAM ID | [TIGR01079] ribosomal protein L24, bacterial/organelle |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.00180393 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.0527176 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAAAAAGT ATAAGATTCG TGAAAACGAC AAGGTCATGG TGCTGGCCGG TAAAGACCGC
GGGAAGATTG GCAAGATCAA GAAGTTGGTC CGAAAGAAAG ACCGTGTGAT CGTAGACCAG
GTAAATATGG TCAAACGCCA TACTCGAGCC AATCCCTATA CCGGAGAATC CGGAGGCATC
CAGGAAAAGG AAGCTCCGAT CCATATTTCC AATGTGGCCG TGGTGTGCGA TGGGTGTACA
AAGCCGACCC GTGTAGGGTA CCGTTTTACC GAAGACGGTC AGAAACGGCG CTATTGCAAA
AAGTGTAATG AACTAATCGA TTAA
|
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| Protein sequence | MKKYKIREND KVMVLAGKDR GKIGKIKKLV RKKDRVIVDQ VNMVKRHTRA NPYTGESGGI
QEKEAPIHIS NVAVVCDGCT KPTRVGYRFT EDGQKRRYCK KCNELID
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