| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dret_2027 |
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| Symbol | |
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| ID | 8419872 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfohalobium retbaense DSM 5692 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013223 |
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| Strand | - |
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| Start bp | 2324906 |
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| End bp | 2326096 |
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| Gene Length | 1191 bp |
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| Protein Length | 396 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 645038615 |
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| Product | aspartate aminotransferase |
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| Protein accession | YP_003198889 |
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| Protein GI | 258406147 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0436] Aspartate/tyrosine/aromatic aminotransferase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.00000000277317 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.0077207 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGTCGATGT TGAGCCAACA GGTGCAGACC TATTTGGAAA GTTCCTCATG GATCCGCCGG
ATGTTCGAGG CCGGGCGGGA GATGAAGGCC AAATACGGCG AAGACCAGGT GTATGATTTC
AGTTTGGGCA ATCCGGACCT CCCCCCGCCT GCAGCCGTGA CCAAAGGGTT GCAGCGCCTG
GCTGAACAGG CGCAGTCGTC CTATGCCTTC GGGTATATGC CCAATGCCGG GTATCCTGAT
GTCCGGCAAG CCCTGGCCCA GCGCTTGTCC CGCGAGCAGC AGGTCGCGCT TTCCGAGCAG
GAACTGTTGT TGAGCTGTGG GGCCGCCGGA GGGCTGAATG TGTTGTTCCG GGCGATCCTG
GAGCCCGGGG ACGAAGTGGT CTGTCCCGCG CCCTTTTTTG TGGAGTATAC CTTTTACGTC
CAAAACCACG GCGGCGTCCT GCGCACGGTC CCCTCACGCG AACCGGATTT CGCTCTGGAT
ATTGAAGGCA TTGAGGCGGC TCTCTCGGAG AAGACCCGGA TTGTGCTCAT CAATTCCCCC
AATAACCCGA CCGGGCGGGT CTATTCTGCA TCGGAGCTGC GCCAACTCGC GGCTGTCCTC
GACGCAGCAA GCCGCAAGTA CGGCCGGCCC ATCCTGCTTG TGTCCGACGA GCCGTACCGT
TTCTTGACTT TTGACGGAAC GCAGGTGCCC CCTGTTTTGC CGGCCTACCA ACACAGTGTG
GTGGTCAGTT CCTTTTCCAA GAATCTGTCC CTGGCCGGAG AACGGGTCGG GTATTTGGCT
TTGAATCCGG AGATGCCTGG AAAAGAGGAA CTTATGGACG GCTTGGTATT GACCAACCGC
ATCCTCGGTT TTGTCAATGC TCCAGCCCTT GGCCAGCGTC TTGTCGGCTA TTGCCTGGAG
GCCTCGGTGG ATCTCGAGGT CTATGAAAAA CGACGGGCGG CCATGGTCGA GGCCCTTGAC
GCCGGGGGCT ATACCTATGC CGTGCCCCAA GGGGCGTTTT ATTTCTTTGT CCAGGCCCCA
GGCGGCGACG ATGTCGCCTT TGTCCAGACC CTCCAGGAAG AGCGGGTTTT GGCTGTCCCA
GGTTCCGGAT TCGGTTTTCC CGGCTATTTC CGGTTGTCTT TTTGCGTTCC TGAAACGGTT
ATTCGCAATG GCGCCGCCTC CCTGGCCCGG GCCCGTCAAC GGTGGCAATG A
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| Protein sequence | MSMLSQQVQT YLESSSWIRR MFEAGREMKA KYGEDQVYDF SLGNPDLPPP AAVTKGLQRL
AEQAQSSYAF GYMPNAGYPD VRQALAQRLS REQQVALSEQ ELLLSCGAAG GLNVLFRAIL
EPGDEVVCPA PFFVEYTFYV QNHGGVLRTV PSREPDFALD IEGIEAALSE KTRIVLINSP
NNPTGRVYSA SELRQLAAVL DAASRKYGRP ILLVSDEPYR FLTFDGTQVP PVLPAYQHSV
VVSSFSKNLS LAGERVGYLA LNPEMPGKEE LMDGLVLTNR ILGFVNAPAL GQRLVGYCLE
ASVDLEVYEK RRAAMVEALD AGGYTYAVPQ GAFYFFVQAP GGDDVAFVQT LQEERVLAVP
GSGFGFPGYF RLSFCVPETV IRNGAASLAR ARQRWQ
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