| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dret_2007 |
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| Symbol | |
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| ID | 8419852 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfohalobium retbaense DSM 5692 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013223 |
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| Strand | - |
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| Start bp | 2304961 |
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| End bp | 2307105 |
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| Gene Length | 2145 bp |
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| Protein Length | 714 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 645038595 |
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| Product | UvrD/REP helicase |
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| Protein accession | YP_003198869 |
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| Protein GI | 258406127 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0210] Superfamily I DNA and RNA helicases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.0358603 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGACCATA TTGAATACGA GCGCCATCTC AACCAGGCGC AATTGGAAGC CGTGCAGACG
CTGCAGGGCC CGGTGCTGGT CATCGCCGGC GCTGGTAGCG GCAAGACCAG AACGGTGGTC
TACCGTTTGG CCCGGTTGGT GGAAAACTCC GTCCCACCGG AATCGATCCT GTTGTTGACC
TTCACCCGCA AGGCCGCCAA CGAAATGCTC ACCCGGGCGG CGCATCTCGC CGGACAGGGC
TTGCATGGCG TGGCCGGGGG GACTTTTCAC GCCTTCGCGT TCGGCATGCT GCGTCGCTTC
GGGCAACGCT TGGGCTATGA CCAGGGGGTG AGCATCATGG ACCGCTCCGA CGCCGAAGGG
GTGGTCAAGC AGGTCCGGGA GATGGAGGGG GTCGGCAAGG GAGACCGGTC CTTTCCGCGC
AAGGGGGCGG TTTTGTCCCT GATGAGCAAG GCCCGGAACA AGGAACGCGA CCTGGAAGAC
ATCCTGGCCA GCGAGGCGGG CCACCTTTTG CCCCATGCTG AAGGGATCCA GATTATCCAG
CGCGGGTACG AGGCGTTCAA GGCCAAGCAC GGCCTGCTCG ACTACGACGA CCTGCTGTTC
AAATTCGAGA CCCTGCTTCG CGAACACGAG GATATCCGGG ACTTTCTTGT CCAGCGGTAC
AGCCACCTGA TGATCGATGA GTTCCAGGAT ACCAACCTGG TCCAGGGACG ACTGGTCCGC
CTCTTGTCCG GCCCGGAGGC CAATGTCATG GCTGTGGGGG ACGACGCCCA GTCTGTGTAC
GCCTTTCGCG GCGCCACGGT GAACAATATC CTCCAATTCA CTTCCGATTT TCCCGGGACC
AAAGTCATCA AGCTGGAGCA GAATTACCGC TCTACCCAGC CCATTTTGGA ACTCACGAAT
CAGATTCTCG GTCAGGCCAC AGCCAAATAC GAGAAACATT TGTTCTCCGA GCGCATCGAA
GGCCCGAAAC CGCAGGTGGT CCGTCCCCTG AGTGATATGA CCCAGGCTCA GGGTGTGGTG
GACAAGATCG TGGAATTGTC CCGCACGACC CCGCTGCACG ATATCGCGGT CCTGTTCCGG
GCCGGGTACC AGTCGTATCC GCTGGAAGTG GCCTTGAATA AACTCGGGAT CGGGTATCAG
AAATTCGGGG GCATGCGCTT TGCCGAATCG GCCCACATCA AAGATTTTGT GGCCCATTTG
CGCCTGGTGG CCAACCCTGC GGATCTGCCG GCCTGGCAGC GGGCACTTTC GCTATTGCCC
GGCATCGGCC CCAAGACCTG TGAACGGATC TACGAGGCCA CCCTGCACGG CGACGAGGCG
TATATGCGCC GGACCTGCAA ACGGGTCCCG GAACTCGAAA ACACCTTGAC GCTCCTGGAT
AATCTCCGCA ACAGCCGCCT CGGTGTCGCA CCGGTCATCG AACAACTGCT CGATTATTAC
CGGCCCCATA TGGAGGAGCG GTATCCGGAC GATTATCCCA AGCGCCAGGC CGGGCTGGAA
GAGCTGGCCC AGATTGCGGC CGGGTATACC AAACTCGAAG ATTTCCTGGC GGATATGAGC
CTGGACAATC CTGATCCCGG CAGCGGACAT GGGGTCGAGG AAGACAAGGT CGTGCTCTCG
ACGATCCACT CGGCCAAAGG GTTGGAATGG TCGGCTGTTT TGCTTATCGA TCTTGTCGAA
GACCGCTTCC CCTCCCGTCA CGCCTTGTCC CGGCCTGATG ACATGGAGGA AGAGCGGCGG
CTGATGTATG TGGCCTGTAC CCGGGCCCGA GATTTTCTGG GCTTGTATGT CCCGGACACG
GTCTACAAAC GCAATCAGGG CTCCACCCCG GTCTTGCCCA GTCCTTTTGT CCAGGAATTG
CCGAGTTCGA CATATGAAGA GTGGCGGGAA GGGTATGCCG GCGGATTCCG GCGGCAGCAG
GAGCCAGCTC CGAAACCAGC TGCGCAGCGT AGCGTGCAGG ACGACGCCCC GGTCAATTCC
GCATCCACGT CTCAGGCCCA GCCCAGCAAT GGGTATTGCC GGCACAAGAT TTTTGGACGG
GGCAAGATCC TTTCGTTTAT ACCGCCGAAT AAGTACAAGG TGAACTTCAG CGGTTTCGGG
ATCAAGACCA TGATCGCTGA TTACCTGCAA ATGGAAGAGT CTTGA
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| Protein sequence | MDHIEYERHL NQAQLEAVQT LQGPVLVIAG AGSGKTRTVV YRLARLVENS VPPESILLLT
FTRKAANEML TRAAHLAGQG LHGVAGGTFH AFAFGMLRRF GQRLGYDQGV SIMDRSDAEG
VVKQVREMEG VGKGDRSFPR KGAVLSLMSK ARNKERDLED ILASEAGHLL PHAEGIQIIQ
RGYEAFKAKH GLLDYDDLLF KFETLLREHE DIRDFLVQRY SHLMIDEFQD TNLVQGRLVR
LLSGPEANVM AVGDDAQSVY AFRGATVNNI LQFTSDFPGT KVIKLEQNYR STQPILELTN
QILGQATAKY EKHLFSERIE GPKPQVVRPL SDMTQAQGVV DKIVELSRTT PLHDIAVLFR
AGYQSYPLEV ALNKLGIGYQ KFGGMRFAES AHIKDFVAHL RLVANPADLP AWQRALSLLP
GIGPKTCERI YEATLHGDEA YMRRTCKRVP ELENTLTLLD NLRNSRLGVA PVIEQLLDYY
RPHMEERYPD DYPKRQAGLE ELAQIAAGYT KLEDFLADMS LDNPDPGSGH GVEEDKVVLS
TIHSAKGLEW SAVLLIDLVE DRFPSRHALS RPDDMEEERR LMYVACTRAR DFLGLYVPDT
VYKRNQGSTP VLPSPFVQEL PSSTYEEWRE GYAGGFRRQQ EPAPKPAAQR SVQDDAPVNS
ASTSQAQPSN GYCRHKIFGR GKILSFIPPN KYKVNFSGFG IKTMIADYLQ MEES
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