Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dret_1989 |
Symbol | |
ID | 8419834 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfohalobium retbaense DSM 5692 |
Kingdom | Bacteria |
Replicon accession | NC_013223 |
Strand | - |
Start bp | 2282805 |
End bp | 2285267 |
Gene Length | 2463 bp |
Protein Length | 820 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 645038577 |
Product | glycosyl transferase group 1 |
Protein accession | YP_003198851 |
Protein GI | 258406109 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0438] Glycosyltransferase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 29 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCCGCGT CGATGCAGTG CGATCTGCAC GTGCACTCCA AGTTTTCCAA GCGCCCGTCC CAATGGATTC TGCAGAAAAT CAATTGCCCG GAAAGCTTTA CCGAGCCCAA GCGTCTTTAC GACATCGCCC GGCAGCGGGG CATGGATCTG GTGACCATCA CCGACCATAA TACCCTGGCC GGTAGCCTGG AAATCGCCCA TCTGGACAAC ACCTTCGTCA GCGAAGAGAT CACCACCTAT TTTCCTGAGG ACCGCTGCAA GCTCCACGTC CTGGCCTACC ATGTGACTGA GGCCCAGCAC GAAGATATCA GCCGTCTGCG GGACAATGTC TTTGACCTCG TCCCCTATCT CCGCGAACAA GCCATCTTCC ACGTCCTGGC CCACCCCCTG TTCGCGGTCA ACGACCGTCT CACCCTGGAC CATGTCGAGC AGACCCTGCT CTTGTTCAAA TATTTTGAAA TCAACGGTGC CCGGGACGCC AGTCTGAACG TTGCTCTGCG CCACATCCTG GACAATCTGA CCCCCGAGCG CATCGAGCAC CTGGCTGAAA AACACGATCT GGCTCCTCTG CCCAAGCGGC CCTGGGAGAA GTACTACACC GGGGGCTCGG ACGACCATTC CAGCCTGAAC ATCGCCCGGA CCCATACGAC GGTGGACGGG GTCACGGATC TGGCTTCATT CTGGGCCGGT GTCGAAGCCG GGCAGACCCG GATCAACGAT ATCGCCTCCA AGCCGCAGAC CATGGCCCAC AACCTCTACG GCATCGCCTA CCAATTCTAT CGCAGCAAAT TCAATCTCGG CCGCCACGCG GGCAAGGACA GTCTGCTCCA GTTCGCGGAT GCGGCGCTGA CCACCGAGGA ACCGGTTTCC TGCTGGTGGG GCAAGATCGG GAAGGTTTTG TCCTACAAGA AGGCGACGTC CCGTTTTTTC CAGTCCGAGT CACCGGGCAT CGAGGATGTC CTGCAGCGCG AAGCCCGGCA GATCATCGCC GACGATCCCC GTCTCCAGGC CATGCTCAAG CAAAACGGCC AGACTGGTTG GGACAATGAG GACAAGTGGT ACGAGTTCGT TCGTCAGGCG GCCTCGAAAG TGGCGCACCA GTTCGGAGAT TCGATCCTGG ACAGCCTGAC CCGGGCCAAG CTGTTCAACG TCTTCAAGGT CCTCGGCTCA GCCGGATCCC TGTATACGCT GCTGGCGCCG TATTTTGTGG CCTACACCAT GTTCAGCCGG GACCGCCTTT TCAGCCGTGA ATGCTGCGAG CAATTGGTCC CGCAGGCGCA GGCCGGGGAG GAAACGCCGA AAGTCCTCGC CTTCACCGAC ACGTATGACG ATGTCAACGG CGTGGCCCTG ACCCTGCAGA TGCAGGTCGA ACTGGCCCGG CAGACGGACA AGGATCTCTC CATCGTGACC TGCGGTGCGC AGGCAAAGGA CGAAGGCGTT ATCGATTTTG ATCCCATCGG TACCTTCCAA TTGGACGAGT ATCCTGAACT GGCCATGACC TATCCGCCGT TTCTGGAGAT GCTCGATTAT TGCTTTGAAA ATGGTGTGAC CCATCTGCAC GCCTGCACTC CTGGACCGGT GGGCCTGGCG GCCCTGGGCG TGGCCAAGAT TCTCCATTTG CCCATCTACG GCACCTACCA CACCGCTTTT CCTCAATATA TGGCCGAGTT GACCGGGGAT ACCGGCATGG AGGACATGAC CTGGAAGTAC ATGACCTGGT TTTATAACCA GATGGACCTG GTCTATGTCC CGTCCAAGGC CACAGGTGAT GAACTGGCGG CCCGGGGGGT GGAAGGAGAC AGGCTGCGGA CCTATCCCCG CGGCATTGAT GTCGAGCGTT TCCACCCCCA GAAGCGCAAC GGGTTCTGGC GTTCCTCGTA TGCTATCAGC GATGAGAAGG TGAAACTGCT GTATGTTGGC CGGATTTCTA AGGAAAAGAA CCTGACCGTG CTGACCCAGA TGTTTCAGGA ATTGACGGCA CGGCGGGCTG ATTTGCCGCT GGAATTGATC CTGGTCGGCG ACGGGCCGTA CCTGGCCGAG ATGCGCCGCG AACTGCGCGG GCTGCCGGTG ACCTTCACCG GCGTGCTGCA TGGGGAAGAA CTGGCCCAAG CCTATGCGTC CAGCGATCTC TTTGTCTTTC CTTCGACAAC GGACACCTTT GGCAATGTTG TGCTTGAGGC CCAGGCCTCC GGCATCCCGG TCCTGGTTTC TGATCAGGGC GGGCCGCAGG AGAATATCGA TCACGGCGAA ACCGGGTTTA TCATTCCCGG CGCCGAGCCC GGTGAATTCG CCCGGCGGGT TGAGGCCTTG GCCGATGACC CCGAGCGGTT GCGCCATATG CAGCGTGCGG CCCGGGACGC AGTGGCTGAT CGCTCCTTCA CCAATGCCTT TCTCCAGAGC TGGCACATGT TTGCTCCGAC CCGGGAAGTC CCTGCGGAAC AGACCTTTGC GACAGCGAGT TAG
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Protein sequence | MSASMQCDLH VHSKFSKRPS QWILQKINCP ESFTEPKRLY DIARQRGMDL VTITDHNTLA GSLEIAHLDN TFVSEEITTY FPEDRCKLHV LAYHVTEAQH EDISRLRDNV FDLVPYLREQ AIFHVLAHPL FAVNDRLTLD HVEQTLLLFK YFEINGARDA SLNVALRHIL DNLTPERIEH LAEKHDLAPL PKRPWEKYYT GGSDDHSSLN IARTHTTVDG VTDLASFWAG VEAGQTRIND IASKPQTMAH NLYGIAYQFY RSKFNLGRHA GKDSLLQFAD AALTTEEPVS CWWGKIGKVL SYKKATSRFF QSESPGIEDV LQREARQIIA DDPRLQAMLK QNGQTGWDNE DKWYEFVRQA ASKVAHQFGD SILDSLTRAK LFNVFKVLGS AGSLYTLLAP YFVAYTMFSR DRLFSRECCE QLVPQAQAGE ETPKVLAFTD TYDDVNGVAL TLQMQVELAR QTDKDLSIVT CGAQAKDEGV IDFDPIGTFQ LDEYPELAMT YPPFLEMLDY CFENGVTHLH ACTPGPVGLA ALGVAKILHL PIYGTYHTAF PQYMAELTGD TGMEDMTWKY MTWFYNQMDL VYVPSKATGD ELAARGVEGD RLRTYPRGID VERFHPQKRN GFWRSSYAIS DEKVKLLYVG RISKEKNLTV LTQMFQELTA RRADLPLELI LVGDGPYLAE MRRELRGLPV TFTGVLHGEE LAQAYASSDL FVFPSTTDTF GNVVLEAQAS GIPVLVSDQG GPQENIDHGE TGFIIPGAEP GEFARRVEAL ADDPERLRHM QRAARDAVAD RSFTNAFLQS WHMFAPTREV PAEQTFATAS
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