Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dret_1970 |
Symbol | trkA |
ID | 8419815 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfohalobium retbaense DSM 5692 |
Kingdom | Bacteria |
Replicon accession | NC_013223 |
Strand | - |
Start bp | 2258171 |
End bp | 2259532 |
Gene Length | 1362 bp |
Protein Length | 453 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 645038558 |
Product | potassium transporter peripheral membrane component |
Protein accession | YP_003198832 |
Protein GI | 258406090 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG0569] K+ transport systems, NAD-binding component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 0.616677 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 0.0915611 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGTATTA TCATCATCGG GGCCGGTGAA GTCGGCTACC ATATTGCCAG CCGGTTGGCG TCGGAAGACA AGGATGTCGT GGTCATTGAT ATCAATGAAA AGGTGCTTGA CCGGGTCTCG GAACAACTCG ACGTCCAGAC AGTGCTGGGC TCGGGGTCGA GTCCCAAAGT TCTGGAGAAG GCCGGGGTGC GGGATGCCGA CATCCTGCTG GCCGTCACTG ACAGCGACGA GATCAACCTG ATCGCCTGCA CCTTCGCCAA TATCCTGTCC CCTGGCCTGC GCAAACTGGC CCGGATCCGG AATCCCGAAT ATACCGACTA CCAGGAGGTC CTGGCCAAGG ATATTCTGGA TATCGATATG GTCATCAACC CTGAAGAAGA GGTTATCCGG ACCATTGAAC GCTTGATGGG GGCCCCGGGG GCTGTCGATA TCAGTGATTT TTCCGAGGGG CGGATCAAGC TTGTCGGTTT GTGGGTTCGC GAGGACAGTC CCGTGGCCGG GACCAAGCTG TTCAACCTCC GTGAAAAGGT TGGGCACGAG CGGCTGATCG TCGCGGCTAT CATCCGCAAT GATCGCTTGA TCATTCCCCA GGGCGATAAC ACGCTCAAAG ACGGCGATCT CATCTACTTT GTCTGTGAGG ACCAGTATCT GAACAAGGTG CTGACAGGCT TTGGCATCCA TAGTGAGACC CTGCGCAACG TCCTGATTAT CGGGGGCGGC AATATCGGAT TCAAGCTGGC CAAGGGTCTG GAAAAACGCA ACGTGCACGT CAAACTCATC GAAATCGATC GGGCCAGGTG CGAATTTCTG GCCGAGAATC TGAACCGGAC TGTCGTCCTT CAGGGCGACG GCACGGACCA GGGCCTGCTG CTGGAGGAAA ATGTCCGCAG CATGGATGTG GTGGTCACGG TGACCGGCGA TGAAGAATAC AATGTGCTCT GTTCGCTTTT GGCCAAGAAT CTCGGGTCCA AGATGACCAT CACCCGGATC AATAAATTCG CCTACCTCCC GCTGGTGCGC ACTGTAGGTT TGGAAAACAC CGTCAGTCCG CGCCTTTCTG CGGTCAACGC CATATTGAAG CACGTCCGGG AAGGGCGTGT CATTTCAGCC ATTTCGATCA AGGAAGAAGC GGAAGCGCTG GAAGCCATCG CCCAGGACAA ATCGGAACTG GTCGGCAAAC CGATCAAGGA CCTGCCCTTT CCGCAGGGGG CGATTGTCTT GTGCCTCATT CGGGGAGAGG ATGTGATCAT CCCTACCGGG GATTCGATCA TCGAACCCAA TGATCGGGTC ATCGTCCTGT CGACCAGGCG CAATATAGCC CGGGTGGAAA AGGCGCTGAC CGTCAAACTG GAGTATCTGT AA
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Protein sequence | MRIIIIGAGE VGYHIASRLA SEDKDVVVID INEKVLDRVS EQLDVQTVLG SGSSPKVLEK AGVRDADILL AVTDSDEINL IACTFANILS PGLRKLARIR NPEYTDYQEV LAKDILDIDM VINPEEEVIR TIERLMGAPG AVDISDFSEG RIKLVGLWVR EDSPVAGTKL FNLREKVGHE RLIVAAIIRN DRLIIPQGDN TLKDGDLIYF VCEDQYLNKV LTGFGIHSET LRNVLIIGGG NIGFKLAKGL EKRNVHVKLI EIDRARCEFL AENLNRTVVL QGDGTDQGLL LEENVRSMDV VVTVTGDEEY NVLCSLLAKN LGSKMTITRI NKFAYLPLVR TVGLENTVSP RLSAVNAILK HVREGRVISA ISIKEEAEAL EAIAQDKSEL VGKPIKDLPF PQGAIVLCLI RGEDVIIPTG DSIIEPNDRV IVLSTRRNIA RVEKALTVKL EYL
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