Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dret_1966 |
Symbol | |
ID | 8419811 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfohalobium retbaense DSM 5692 |
Kingdom | Bacteria |
Replicon accession | NC_013223 |
Strand | - |
Start bp | 2252103 |
End bp | 2254106 |
Gene Length | 2004 bp |
Protein Length | 667 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 645038554 |
Product | adenylylsulfate reductase subunit alpha |
Protein accession | YP_003198828 |
Protein GI | 258406086 |
COG category | [C] Energy production and conversion |
COG ID | [COG1053] Succinate dehydrogenase/fumarate reductase, flavoprotein subunit |
TIGRFAM ID | [TIGR02061] adenosine phosphosulphate reductase, alpha subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.00115626 |
Fosmid Hitchhiker | No |
Fosmid clonability | decreased coverage |
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Sequence |
Gene sequence | ATGCCTCAGA TTCCTGTGAA AGATGAGCCC AAAGGTCTGC CGCTGGCAGA ACCTGAAGTG GTAGAGATGG ATGTCGATGC GTTGATTGTT GGTGGCGGAA TGGGCTCCTG CGGAACGGCT TTCGAGGCTG TTCGCTGGGC CGACAAGTAC GCCCCTGAAC TGAAGATCCT GCTGCTCGAC AAAGCCGCTC TGGAGCGCTC CGGTGCTGTG GCCCAGGGGC TGTCGGCTAT CAATACCTAT CTCGGCGACA ATGAACCCGA CGACTACGTC CGCATGGTCC GGACCGACCT CATGGGCATT GTCCGCGAAG ACCTGATCTA CGACCTTGGC CGCCACGTTG ACGATTCCGT TCACCTCTTC GAGGAATGGG GTCTGCCGTG CTGGGTCAAG AAAGACGGCA AGAACCTCGA CGGCGCCAAA GCCAAGTCCG AGGGCTTGTC CCTGCGCACC GGCGCGACCC CGGTTCGCTC CGGCCGCTGG CAGATGATGA TCAACGGTGA GTCCTACAAG AACATCGTTG CCGAAGCCGC CAAGAACGCC TTGGGCGAAG ACCGCTACAT GGAGCGCATC TTCATCGTGA AGCTGCTCCT GGACGCCAAT GAGCCTAATC GGATCGCTGG CGCCGTCGGT TTCTCCGCCC GTGAAAACAA AGTCTTCATC TTCAAGGCCA ATGCCATCAA CGTGGCCTGC GGCGGCGCCG TGAACGTGTA CCGCCCCCGC TCCACTGGTG AAGGCATGGG TCGCGCCTGG TATCCGGTCT GGAACGCTGG TTCCACCTAC ACCATGGTGG CCCAGGTCGG CGGCGAAATG ACCATGATGG AAAACCGCTT CGTCCCCGCC CGCTTCAAAG ACGGCTATGG TCCGGTCGGT GCCTGGTTCT TGCTGTTCAA GGCCAAAGCC ACCAACGCCA AGGGCGAAGA CTACTGCCAG ACCAATGCGG CCATGCTCAA GCCGTATCAG GATCGCGGTT ACGCCGTCGG TGCGGTTATC CCCACCTGCT TGCGGAACCA CATGATGCTG CGTGAAATGC GCGAAGGTCG TGGCCCGATC TACATGGACA CCGCCACTGC GCTGCAGACC ACCTTCAAGG AGCTCAACAA GCAAGAGCAG AAGCACCTTG AAAGTGAAGC CTGGGAAGAC TTCCTCGACA TGTGCGTCGG TCAGGCCAAC CTCTGGGCGG CCATGAACAT CAAGCCTGAA GAATCGGGCT CTGAGATCAT GCCCACTGAG CCGTACCTGC TCGGTTCCCA CTCCGGTTGC TGCGGTATCT GGGTTTCCGG ACCCGACGAA GACTGGGTCC CTGAAGAATA CAAGATCAAG GCTGACAACG GGAAGGTCTA CAACCGCATG ACCACCGTGA ACGGCCTGTG GACCTGCGCT GACGGCGTTG GCGCCTCCGG ACACAAGTTC TCCTCCGGTT CCCACGCCGA AGGCCGGATC GTTGGAAAGC AAATGGTCCG CTGGTGCGTT GATCACAAGG ATTTCAAACC GGCTCTGAAG CAGTCTGCTG AAGAGCTGAA GAAAGAAATC TATCAGCCGT ACTACACCTA CCAGGAAAAC AAAGACGTCT CCACGGATCC GGTGGTCAAC CCCAACTACA TCTCGCCGCG TAACTTCATG TTCCGCCTGA CCAAGTGCAC GGACGAGTAT GGTGGTGGTT GCTCCACGTA CTACACGACT TCGGAAGCTT TGCTGAAGAC CGGCTTTGAA CTCCTGGACA TGATGGAAGA AGACTCCAAG CTCTTGGCTG CTCGTGACCT GCACGAACTG CTGCGTTGCT GGGAAAACTT CCACCGTCTC TGGACTGTCC GTCTGCACAT GCAGCACATC GAATTCCGTA AGGAAAGCCG TTACCCCGGT TTCTACTATC GTGCTGAGTA CATGGGCATT GATGACAGCA AATGGCGTTG CTTCGTCAAC TCCAAGTACG ATCCGGAAAA GGGCGAGACG ACTCTGTTCA AGCGCCCCTA CATCCAGATC ATTCCCGATC CGATGTCCCC GTAG
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Protein sequence | MPQIPVKDEP KGLPLAEPEV VEMDVDALIV GGGMGSCGTA FEAVRWADKY APELKILLLD KAALERSGAV AQGLSAINTY LGDNEPDDYV RMVRTDLMGI VREDLIYDLG RHVDDSVHLF EEWGLPCWVK KDGKNLDGAK AKSEGLSLRT GATPVRSGRW QMMINGESYK NIVAEAAKNA LGEDRYMERI FIVKLLLDAN EPNRIAGAVG FSARENKVFI FKANAINVAC GGAVNVYRPR STGEGMGRAW YPVWNAGSTY TMVAQVGGEM TMMENRFVPA RFKDGYGPVG AWFLLFKAKA TNAKGEDYCQ TNAAMLKPYQ DRGYAVGAVI PTCLRNHMML REMREGRGPI YMDTATALQT TFKELNKQEQ KHLESEAWED FLDMCVGQAN LWAAMNIKPE ESGSEIMPTE PYLLGSHSGC CGIWVSGPDE DWVPEEYKIK ADNGKVYNRM TTVNGLWTCA DGVGASGHKF SSGSHAEGRI VGKQMVRWCV DHKDFKPALK QSAEELKKEI YQPYYTYQEN KDVSTDPVVN PNYISPRNFM FRLTKCTDEY GGGCSTYYTT SEALLKTGFE LLDMMEEDSK LLAARDLHEL LRCWENFHRL WTVRLHMQHI EFRKESRYPG FYYRAEYMGI DDSKWRCFVN SKYDPEKGET TLFKRPYIQI IPDPMSP
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