| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dret_1889 |
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| Symbol | |
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| ID | 8419732 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfohalobium retbaense DSM 5692 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013223 |
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| Strand | + |
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| Start bp | 2172452 |
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| End bp | 2173126 |
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| Gene Length | 675 bp |
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| Protein Length | 224 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 645038475 |
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| Product | nuclease (SNase domain protein) |
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| Protein accession | YP_003198751 |
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| Protein GI | 258406009 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG1525] Micrococcal nuclease (thermonuclease) homologs |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.058729 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.0179002 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATTTTT GCCGGTTCGG ACGCATGTGG TGCCGAATAA TCGCTGTTCT TGTGGTTGTC
ATGTTCTGGA GCGGTTTGGT CGCCGCTGTC GCCGATGATC ATCGTGTCGC TGAGGTCCGC
TGGATCCCGG ACGGGGACAC GGTCATTCTT GAAGACGATA CCACCATTCG CCTGCAAGGC
ATCGACACCC CCGAGACCAG GCATGACGAC CAACCGGAGC AGTATTTTGC CCAGGAAGCG
CGAAAGGCGC TCCAGATGTA TGTCGAGCAA GGGATGCGTT TTGTCCCCTC CCAGGAAGGC
AAGGACCGTT ATGGACGAGT CCTGGCGCGT GGCTTTCTGA GCGACGGACG CCTGGTCAAC
GAAGTGCTGG TTCGCGACGG TCTGGCCTTT TTCTATCCCC ATCCGCATCA GGATCCCAAA
TTCCAGGACC GCCTCCTGCG GGCCCAACAG GAAGCCATGC GTGCCGGGCG CGGCTTTTGG
CCGCGCATCC TCGATATGCC GGAGGCTGAC GAGCCGTATT TGGGCAACAC CCGAAGTTTT
CGTTTCCACC GTCTGGAATG TCCGTTCGGG CTAAAAACAG CGCAGGGAAA CCGACGCCAT
TTCGGCTCGC TCTATGATGC GTTTGACGCC GGATTCGCGC CATGTCGGCG GTGTACGGTA
TGGCCGGAGA AGTAA
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| Protein sequence | MNFCRFGRMW CRIIAVLVVV MFWSGLVAAV ADDHRVAEVR WIPDGDTVIL EDDTTIRLQG
IDTPETRHDD QPEQYFAQEA RKALQMYVEQ GMRFVPSQEG KDRYGRVLAR GFLSDGRLVN
EVLVRDGLAF FYPHPHQDPK FQDRLLRAQQ EAMRAGRGFW PRILDMPEAD EPYLGNTRSF
RFHRLECPFG LKTAQGNRRH FGSLYDAFDA GFAPCRRCTV WPEK
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