Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dret_1863 |
Symbol | |
ID | 8419706 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfohalobium retbaense DSM 5692 |
Kingdom | Bacteria |
Replicon accession | NC_013223 |
Strand | - |
Start bp | 2134455 |
End bp | 2135093 |
Gene Length | 639 bp |
Protein Length | 212 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 645038449 |
Product | cyclase family protein |
Protein accession | YP_003198725 |
Protein GI | 258405983 |
COG category | [R] General function prediction only |
COG ID | [COG1878] Predicted metal-dependent hydrolase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.171593 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 0.0594978 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAAGTTA TTGATCTCAG CCATTCGTTG TCGTCACACA CGCCGGTCTA CCCGGGGACG GCTCCACCAA CCATTGAACC AGCTTGTACC GTCCTGGAGC ACGGTTTTGC CGAAACAGCG ATCAGCATGT GGTCGCACAC CGGGACCCAT CTCGATGCGC CGTCCCATCT CAAGAGCATG GGAAAATCAT TGGACGATTT TGATATGGCC CACTTTTACG GCCCCGGTCT GTGCATCGAT CTGTCCCATG TGCACGGGTG TTGTATCGGG CTGGCTGAAC TGGAGCCCTA CGCCCAAATT CTGCGCGAGG TCGATTTCGT TCTCCTCGCC ACCGGATGGG ATCAGTATTG GGGCCATGAA GCGTATTTCC ATGACTATCC GGTTCTCGCG CCCGGAGCCG CGAAATGGCT CTCCGGATTC CGGCTCAAAG GGGTCGGGCT GGATACGCTT TCGGCCGATC GCGACGATTC TGTGAAGTTT CCTGTCCACC AAGTCCTGCT GGACCAGGAT ATCGTGCTGG TCGAAAACCT GACGAATCTG CTACAGTTGC CGCAAAGCGA CTTTTCGTTT TCTTGCTTTC CTTTGTCGAT CACCGGTGGT GATGGAAGTC CGACGCGTGC GGTAGGTATT GTTGAGTGA
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Protein sequence | MKVIDLSHSL SSHTPVYPGT APPTIEPACT VLEHGFAETA ISMWSHTGTH LDAPSHLKSM GKSLDDFDMA HFYGPGLCID LSHVHGCCIG LAELEPYAQI LREVDFVLLA TGWDQYWGHE AYFHDYPVLA PGAAKWLSGF RLKGVGLDTL SADRDDSVKF PVHQVLLDQD IVLVENLTNL LQLPQSDFSF SCFPLSITGG DGSPTRAVGI VE
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