| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dret_1858 |
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| Symbol | |
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| ID | 8419699 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfohalobium retbaense DSM 5692 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013223 |
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| Strand | + |
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| Start bp | 2129829 |
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| End bp | 2132429 |
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| Gene Length | 2601 bp |
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| Protein Length | 866 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 645038442 |
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| Product | ATP-dependent chaperone ClpB |
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| Protein accession | YP_003198720 |
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| Protein GI | 258405978 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0542] ATPases with chaperone activity, ATP-binding subunit |
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| TIGRFAM ID | [TIGR03346] ATP-dependent chaperone ClpB |
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 0.0000000217935 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | unclonable |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.0630918 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGATCTCA ATAAATTCAC CCAAAAATCA CAGGAAGCGA TCAGCGAGGC GCAGAATATC
GGCGTGCGGC ACAGCCATCA ACAGATCGAC GCCGAACACG TTGCTTTGGC CTTGGCCGAA
CAAGAGGATG GCCTTATTCC GCGCCTGCTC GAGCGCCTCG GCAAAGATCC CAAGAATTAT
ATCGCGGCCC TGGAGGCCGA ATTGAAAAAG GTGCCGCAAG TCAGCGGCCC CGGCGCCCAG
CAAGGGCAGA TATATGTCAC CCAGCGGTTG AATCAGGTTC TGGTCAAATC CCAGGACATG
GCCAAGAAAA TGCAGGACGA CTACGTCTCT GTAGAGCATA TTTTCCTGGC CCTGCTGGAG
GAAAGCGCGT CCAGCGGTGT CGGGCGCGTC CACAAGCAGT TCGGACTGGA CAAAGACACA
GTCCTGCAGG CCCTGACCGA TGTCCGCGGC CACCAGCGCG TCACTTCGTC CAACCCGGAA
GGGACCTATG ACGCCCTGAA AAAATACGGG CGCGATCTGG TCGACGATGC GCGCAAAGGC
CGCCTGGACC CGGTCATCGG CCGGGACACC GAGATCCGGC GGGTCATCCG CATCCTCTCC
CGGCGCACCA AAAATAACCC GGTCCTGATC GGCGAGGCCG GGGTCGGCAA GACTGCCATC
GCTGAAGGGC TGGCCCAGCG CATCCTGAAC CAGGACGTTC CTGAAGGCCT CAAGCACAAG
ACCGTCTTTG CCCTGGACAT GGGCGCCCTG CTGGCCGGGG CGAAATACCG CGGCGAATTT
GAGGAGCGCC TCAAGGCCGT GCTCAAGGAG GTCCAGGAAT CCGAGGGGCA GATCATCATG
TTTATTGATG AGATGCACAC CATTGTCGGC GCGGGCAAAG CCGAAGGGGC CATGGATGCC
GGCAACCTCT TGAAACCCAT GCTGGCCCGC GGTGAACTGC ACTGCATCGG CGCGACCACC
CTGGACGAGT ACCGCAAGAA CATCGAGAAA GACCCCGCCC TGGAGCGCCG CTTCCAACCG
GTCATGGTTG AAGAGCCGGA CCTGGAGGAT ACCATCTCCA TCTTGCGCGG CCTGCGGGAA
CGCTTTGAGG TCCACCACGG AGTGCGCATC GCTGACGCGG CCCTGGTCAC TGCCGCGACG
CTGTCGCACC GCTATATCAC CGACCGCCAG CTGCCGGACA AGGCTATCGA CCTCGTTGAT
GAGGCCGCGG CCATGATCCG CACGGAAATC GACTCCCTGC CCACGGATCT TGACGAGATC
AACCGGCGGA TCATGCAGTT GGAGATCGAA CGCGAGGCCC TGAAGCGCGA AAAAGACGAG
GCTTCCAAGG AGCGGCTGGA ACGGCTGGAA AAGGAACTGG CTGACCAGAA GGAAAAGCAG
ACCACGCTGT TGGCCCAGTG GGAGAAAGAA AAAGAGGGCA TTAACGAACT TCGCTCCCTG
AAGGAAGAGT TGGAAAAGAC CCGGCGGGAC ATCGAGGAGG CCGAACGCAA TTACGACCTG
AACAAGGCCG CGGAACTGCG CTACGGCAAA CTCAACGAAC TCGAGCGGAA AATCGCGGAG
CGCGAACGAT CTCAGGACGA GGCCGGCGAA TCGCCGCAAT TGCTCAAGGA GGAGGTCGGC
GCCGACGATG TCGCCGAAAT CATTTCCCGC TGGACCCGCA TCCCGCTGTC ACGCCTCCTG
GAAGGCGAAA GGGAAAAACT CCTGCGTCTG GGCGACGTGC TGCACGAGCG GGTCGTTGGC
CAGGACGAGG CTGTCGAGGC GGTCGCTGAC GCCGTCCTGC GCGCCAGGGC CGGGCTCAAG
GATCCCCGCC GGCCCATCGG CTCCTTCATT TTTCTCGGCC CCACCGGCGT CGGGAAGACG
GAACTGTGCA AGACCCTGGC CGAATCGCTC TTTGACAGTG AAGAAAACAT GATCCGGCTG
GATATGTCCG AATACATGGA AAAACATACC ACAGCCCGCT TGATCGGGGC GCCTCCGGGA
TATGTCGGCT ATGAGGAAGG CGGACAATTG ACCGAGGCCG TGCGGCGCAA ACCGTATTCG
GTGATCCTTT TCGACGAGAT CGAAAAGGCC CACGCCGATG TCTTCAACAC CTTGCTCCAG
ATCCTGGATG ACGGCCGACT GACCGACAGT CACGGTCGGA CCGTGGATTT CAAAAACACG
ATCATTATCA TGACCTCCAA TCTCGGGTCC GAATTCATGC TCGAGGGCAT CAGCGGCGAG
GGGGAACTCA CGGACACGGC CCGCTCCCAG GTCATGAACA CCCTGCGCGG CTCATTCCGG
CCCGAATTTC TGAACCGGGT CGACGAGATT GTCATGTTCA CCCCGCTGAC CCGCGAGCAG
ATCAAAGAGA TCATCGGCCT GCAGATGCAG CAGCTCCACA CGCGTCTGGA AGACCGCAAG
ATCACTTTGG AACTCACGGA AAACGCCCGC GAACTCATCG CCCGTGAGGC CTACGACCCG
GTTTACGGCG CTCGGCCCTT GCGGCGGTTC CTGCAGACCC ACATCGAAAC CCCGCTGGCC
AAACAGCTCA TTGGCGGGCA CCTCAAAGAA GGGCAACATG TTGTTGTCGA TGGGGTTGAC
AGCGAGCTCG TGTTTCAATA A
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| Protein sequence | MDLNKFTQKS QEAISEAQNI GVRHSHQQID AEHVALALAE QEDGLIPRLL ERLGKDPKNY
IAALEAELKK VPQVSGPGAQ QGQIYVTQRL NQVLVKSQDM AKKMQDDYVS VEHIFLALLE
ESASSGVGRV HKQFGLDKDT VLQALTDVRG HQRVTSSNPE GTYDALKKYG RDLVDDARKG
RLDPVIGRDT EIRRVIRILS RRTKNNPVLI GEAGVGKTAI AEGLAQRILN QDVPEGLKHK
TVFALDMGAL LAGAKYRGEF EERLKAVLKE VQESEGQIIM FIDEMHTIVG AGKAEGAMDA
GNLLKPMLAR GELHCIGATT LDEYRKNIEK DPALERRFQP VMVEEPDLED TISILRGLRE
RFEVHHGVRI ADAALVTAAT LSHRYITDRQ LPDKAIDLVD EAAAMIRTEI DSLPTDLDEI
NRRIMQLEIE REALKREKDE ASKERLERLE KELADQKEKQ TTLLAQWEKE KEGINELRSL
KEELEKTRRD IEEAERNYDL NKAAELRYGK LNELERKIAE RERSQDEAGE SPQLLKEEVG
ADDVAEIISR WTRIPLSRLL EGEREKLLRL GDVLHERVVG QDEAVEAVAD AVLRARAGLK
DPRRPIGSFI FLGPTGVGKT ELCKTLAESL FDSEENMIRL DMSEYMEKHT TARLIGAPPG
YVGYEEGGQL TEAVRRKPYS VILFDEIEKA HADVFNTLLQ ILDDGRLTDS HGRTVDFKNT
IIIMTSNLGS EFMLEGISGE GELTDTARSQ VMNTLRGSFR PEFLNRVDEI VMFTPLTREQ
IKEIIGLQMQ QLHTRLEDRK ITLELTENAR ELIAREAYDP VYGARPLRRF LQTHIETPLA
KQLIGGHLKE GQHVVVDGVD SELVFQ
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