Gene Dret_1854 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDret_1854 
Symbol 
ID8419695 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfohalobium retbaense DSM 5692 
KingdomBacteria 
Replicon accessionNC_013223 
Strand
Start bp2126954 
End bp2127307 
Gene Length354 bp 
Protein Length117 aa 
Translation table11 
GC content61% 
IMG OID645038438 
Producthypothetical protein 
Protein accessionYP_003198716 
Protein GI258405974 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value8.89871e-13 
Plasmid hitchhikingNo 
Plasmid clonabilityunclonable 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.194758 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGACACAG CTATCGATTT TGAAACCATT GTCCAAAAGG TCGCCCAGGT GGCCATTGTT 
CTTGATGCGG AGCTGACCAT CGTCTGGGCC AACGCCAAGG CGGCTGAGGT CGCCGGCTGC
GATCCGGTGG GGCAGAAATG TTACGCCGTG TATCAGGACC GGCAAACCCC ATGCGAGGGG
TGCCACACCC TGGAGACTTT TGCGACCGGC AAAAGCATCC CGAACACGAG CACGGTGACT
GAGGCTGACG GTTCGCAGCG GTTTTTCGAC GGATTCACGA CGGTGGTCGG CCGGGACGCG
GACGGCACCA TCCGCTACGT AGCCGAAGTC GCCGGAGAGG TGCCCCATTT GTAG
 
Protein sequence
MDTAIDFETI VQKVAQVAIV LDAELTIVWA NAKAAEVAGC DPVGQKCYAV YQDRQTPCEG 
CHTLETFATG KSIPNTSTVT EADGSQRFFD GFTTVVGRDA DGTIRYVAEV AGEVPHL