| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dret_1848 |
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| Symbol | |
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| ID | 8419689 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfohalobium retbaense DSM 5692 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013223 |
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| Strand | - |
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| Start bp | 2119840 |
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| End bp | 2120550 |
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| Gene Length | 711 bp |
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| Protein Length | 236 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 645038432 |
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| Product | two component transcriptional regulator, winged helix family |
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| Protein accession | YP_003198710 |
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| Protein GI | 258405968 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.0065624 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGTGAGGG CGCCTGAAAG CCGTATCCTC CTTGTCGAGG ATGAGGAGAG CCTGGCTGTC
GGATTGCAGT TCAATCTGCA ACAGGAAGGG TATGTGGTCG AGCGAGCGGT TGACGGCAGA
GAGGCGTTAA CCCTTTTTGC CGCACAGGAG TTCGATTTGA TTATCCTGGA TCTCATGCTG
CCGTATGTGG ACGGGTATGA GGTGGCCAGA GAGGTTCGCG CCGTCTCGCC ACAACTTCCG
ATTTTGATGC TCACTGCGCG CACCACGGCG AAAGACCGCA TTCAAGGCCT GGAGGCGGGG
GCCGACGATT ATTTGACAAA GCCGTTTCAT CTCAAGGAAT TGCTGCTGCG GGTTCAGGGG
ATGCTCAAAC GCAAGCAGTG GTATCAGGAT GTCACGCAGC AGGAACCGGT CGTCCGTTTT
GGGGAGAATA CGGTCAATTT TGCGACGCTG CGGGCTCAAA CCCGGAAGGA AGAGTTCCAG
CTTACCGCCC GGGAAGCGAT GGTTCTTAAA TATCTGATTG AGCACGAAGG CCGGGTGGTG
TCACGCAAAG AACTTCTGGA AAACGTCTGG CAGGTCGAAG GCACGGTGCA GACCAGGACA
GTGGACGCCT TTATTGCCCG CTTGCGCAAG TATTTCGAAG CCGACCCCAA GCATCCGGAG
TTCATTACCA GTGTTCGCGA GGTGGGGTAC CAGTTTCTTT CTGGGGCGTG A
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| Protein sequence | MVRAPESRIL LVEDEESLAV GLQFNLQQEG YVVERAVDGR EALTLFAAQE FDLIILDLML
PYVDGYEVAR EVRAVSPQLP ILMLTARTTA KDRIQGLEAG ADDYLTKPFH LKELLLRVQG
MLKRKQWYQD VTQQEPVVRF GENTVNFATL RAQTRKEEFQ LTAREAMVLK YLIEHEGRVV
SRKELLENVW QVEGTVQTRT VDAFIARLRK YFEADPKHPE FITSVREVGY QFLSGA
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