Gene Dret_1841 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDret_1841 
Symbol 
ID8419682 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfohalobium retbaense DSM 5692 
KingdomBacteria 
Replicon accessionNC_013223 
Strand
Start bp2112581 
End bp2113000 
Gene Length420 bp 
Protein Length139 aa 
Translation table11 
GC content59% 
IMG OID645038425 
Product4Fe-4S ferredoxin iron-sulfur binding domain protein 
Protein accessionYP_003198703 
Protein GI258405961 
COG category[C] Energy production and conversion 
COG ID[COG0437] Fe-S-cluster-containing hydrogenase components 1 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value3.40892e-12 
Plasmid hitchhikingNo 
Plasmid clonabilityunclonable 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCACATAC GTGCCAATTT TGACCGCTGC ACCGGCTGCC GCCTCTGTCA ATTCGCCTGT 
GCCGAGCGGG CGTGTTCAGG ATACAACCCG CGCCACAGCC TGTTGCGCAT CCAGAACTCC
ACTGAGCATC TCTACAACTT CCCTATCGTC TGCAATCATT GCCTAAACGC CTATTGCCAG
AATGTCTGTC CGGCCCGGGC CATCTCCCGC GACGAGCAGA CCGGGGCTGT GGTCATTGAC
GAAAATCGGT GCATCTCCTG CGGGTTATGC GCCCAATATT GCCCCCTGGG GGTCATCATC
CGGCACCCGG AAAGCGACAA ATATGCAAAA TGCGATCTTT GCGGCGGGCA CCCCCTTTGC
GTCCAGGCCT GCCCCACAGG CGCCCTTGAA ATCGCGTACA CGGGAGGCGA CCATGCCTAA
 
Protein sequence
MHIRANFDRC TGCRLCQFAC AERACSGYNP RHSLLRIQNS TEHLYNFPIV CNHCLNAYCQ 
NVCPARAISR DEQTGAVVID ENRCISCGLC AQYCPLGVII RHPESDKYAK CDLCGGHPLC
VQACPTGALE IAYTGGDHA