| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dret_1838 |
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| Symbol | |
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| ID | 8419679 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfohalobium retbaense DSM 5692 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013223 |
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| Strand | - |
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| Start bp | 2108462 |
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| End bp | 2109781 |
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| Gene Length | 1320 bp |
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| Protein Length | 439 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 645038422 |
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| Product | major facilitator superfamily MFS_1 |
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| Protein accession | YP_003198700 |
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| Protein GI | 258405958 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG2270] Permeases of the major facilitator superfamily |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.047376 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAGAAAGC ATATCAGAAT CTTCGCCAAC GATACAACAG ACCAGCAGCG TAACTGGTGG
GCGTGGTGTT TGTACGATTG GGCCAACTCC GCTTTTGCCA CCGTCATCCT GGCAGCGGTT
TTGCCGGTCT ATTTCGTGAG CCTGGTCCCC TCTGGCGGCG CGCCGGTGCC CGGGATGGAC
CTCCGACTGC CGGCGACAGT GCTTTGGAGT TATGCCGTGG CCCTGTCGAT GGGGTTTCTG
GTCCTGTTCG CCCCCTATCT CGGTGCCTGG GCCGATAGGC ACGGGCGGCA TCTGCCTTTA
CTGGCCGTGT TGTGTTGCAG CGGGGCGCTG GCTACAGCCG GGCTTGCGGC AGTCGATTCG
TATTGGGCTG CGGCGGGGCT GTTCATGTTT GGGAATTGGT GTTTTGCGGC CGGAAACATC
CTCTATAACG CGTATCTTCC AGCTTTGGCC AAAACGGACA GCGAGAAGGA CCTCCTGTCG
GCCCGTGGCT TTGCCGCCGG GTATGCCGGG GGTGGCCTGG CTCTGCTGGT GGTGATGGTG
CTGATACTCA AGCCCGGCTG GTTTGGGTTG CCGGACCCCG GCGCCGCCAC GCGGGCCGGG
TTCGTGCTCA CGGGGCTGTG GTGGATCGGG TTCGCCCTGC CGGTCTTTAC CCGGTTGCGC
GGTGTGGCCA TGCGGGGACC CGATACGGCC CTGCCCCGGG GATTGTCGGG GTATCTGCGG
ATCTTTGGTG AGATTCGGGG CCATGCCAAC CTGTTGCGAT TTTTGGTGGC CTATTTGCTC
TATAACGACG GTATCCAGAC AGTAATCGCT GTTTCTGCGG TCTTTGCCAG GGAGACGGTT
GGCTTGTCTC AGAATACGGT GCTGGGGTGT TTTTTGATGG TCCAGTTCGT GGCCGCTCCT
GGAGCGTTGG TCTTTGGGCG GTTGGCCAAC AGGTGGGGCG TCAAACCGAT GCTGCTCGCA
GCGCTGGTGC TTTTCATGGG GGTCGTGGTC TATGCGGTGC GCCTGGAGAC GGCCGGTCAG
TTCTGGATTT TGGGAGGGGC CGTGGCTCTG GTGCTTGGAG GCAGCCAGGC CTTGTCCCGT
TCGCTTTTCG CCAGGATGGT CCCGGAAGAA AAGAAAGCGG AGTTTTTCGG TTTTTTCAGC
ATTAGCGCCA AATTCGCGGC CATTGTCGGT CCTTTTGTCT TTGCCAGTGT GGCAACCCTA
ACCGGGTCTG TACGCGGCGG CCTGCTCTTT TTGCTGGTCT TCTTTCTTGC CGGTGCAAGC
TTGTTGTGGA CTGTGGAGAC TCCCCGGGCT GAGGCTTCGA ACACAGGAGC GTCTTCTTGA
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| Protein sequence | MRKHIRIFAN DTTDQQRNWW AWCLYDWANS AFATVILAAV LPVYFVSLVP SGGAPVPGMD
LRLPATVLWS YAVALSMGFL VLFAPYLGAW ADRHGRHLPL LAVLCCSGAL ATAGLAAVDS
YWAAAGLFMF GNWCFAAGNI LYNAYLPALA KTDSEKDLLS ARGFAAGYAG GGLALLVVMV
LILKPGWFGL PDPGAATRAG FVLTGLWWIG FALPVFTRLR GVAMRGPDTA LPRGLSGYLR
IFGEIRGHAN LLRFLVAYLL YNDGIQTVIA VSAVFARETV GLSQNTVLGC FLMVQFVAAP
GALVFGRLAN RWGVKPMLLA ALVLFMGVVV YAVRLETAGQ FWILGGAVAL VLGGSQALSR
SLFARMVPEE KKAEFFGFFS ISAKFAAIVG PFVFASVATL TGSVRGGLLF LLVFFLAGAS
LLWTVETPRA EASNTGASS
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