Gene Dret_1821 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDret_1821 
Symbol 
ID8419662 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfohalobium retbaense DSM 5692 
KingdomBacteria 
Replicon accessionNC_013223 
Strand
Start bp2091371 
End bp2092135 
Gene Length765 bp 
Protein Length254 aa 
Translation table11 
GC content54% 
IMG OID645038405 
Productmolybdenum ABC transporter, periplasmic molybdate-binding protein 
Protein accessionYP_003198683 
Protein GI258405941 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0725] ABC-type molybdate transport system, periplasmic component 
TIGRFAM ID[TIGR01256] molybdenum ABC transporter, periplasmic molybdate-binding protein 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.233518 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGACGTT GTCTCTTTGT GGTGCTTGTT GTGTGTTTTT GGGGGCTTTC GACCGCTTTT 
GCCGCCGATC TCGTGGTGTA TTCTGGTGCA GGGCTGATGA AGCCCATGGA AGAATTGCGA
ACCAATTTTG AAACCGAGCA CGGCGTGGAA GTGGATATCC ATTACGGCAG TTCCGGTGAG
CTCTTTGGCA TGCTCAAGAT GGGCCAAGAA TGCGATGTCT TGGTTCCCGG ATCGGAAAGA
TACACCTACG ACGCCTTGCG CAATGGATGG ATTCAAGAAG ATTCCATCAA GAAGATGGTC
AAGCATGTTC CGGTCATCGC CGTTCCCAAG GGCAATCCCG GGCAGATCGA AGGGCTCCAG
GATTTTACCC GCAACGGCCT GAAACTCGCT ATGGGCGACC CCAATTCACC GGCCATCGGG
CGTGTGGGAC GCAAGATATT CAAGAAACAA GGCCTCTGGG AGGCGGTCAA ACCCAATATT
GATGTCTATG CACCGACCGT AAATCAACTT TTGGTCTATG TGGCGATGGA ACAGGTCGAT
GGGGCCCTCA TTTGGGGCGA TCTGGTGACC TGGGCTGAGG CCAAAGGGAA GGTGGAGGTC
GTCTCCATTG CCAAAGAGGC CAATATCATC AAGACGATTC CCACCGGATT GACCACGTTT
GCCGAGGGCA ATTCCTGGGC CGAAAAATTC AGTGCCTATA TCAGTTCCGA GGCAGGTCTG
GCGATTTGGA CCCAGTGGGG TTTTGAGCCA TGTTCCGGCC GGTAA
 
Protein sequence
MRRCLFVVLV VCFWGLSTAF AADLVVYSGA GLMKPMEELR TNFETEHGVE VDIHYGSSGE 
LFGMLKMGQE CDVLVPGSER YTYDALRNGW IQEDSIKKMV KHVPVIAVPK GNPGQIEGLQ
DFTRNGLKLA MGDPNSPAIG RVGRKIFKKQ GLWEAVKPNI DVYAPTVNQL LVYVAMEQVD
GALIWGDLVT WAEAKGKVEV VSIAKEANII KTIPTGLTTF AEGNSWAEKF SAYISSEAGL
AIWTQWGFEP CSGR