Gene Dret_1819 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDret_1819 
Symbol 
ID8419660 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfohalobium retbaense DSM 5692 
KingdomBacteria 
Replicon accessionNC_013223 
Strand
Start bp2089543 
End bp2090604 
Gene Length1062 bp 
Protein Length353 aa 
Translation table11 
GC content58% 
IMG OID645038403 
Productmolybdate ABC transporter, ATPase subunit 
Protein accessionYP_003198681 
Protein GI258405939 
COG category[E] Amino acid transport and metabolism 
COG ID[COG3842] ABC-type spermidine/putrescine transport systems, ATPase components 
TIGRFAM ID[TIGR02142] molybdenum ABC transporter, ATP-binding protein 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.147813 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTTTTC TGGAAATCCG CGGTTTGAGC AAGGACCTGG GCGAATTTTC CTTGAAAGAA 
GTGGATCTCG ACCTGGAGAC AGGAACTTAT CTGGCGGTCA TCGGACCGAC CGGAGCCGGG
AAGACCATTT TACTTGAATG TCTGGTGGGA TTCTATCTGC CGGAGGCGGG CCATATCCTT
CTGGAAGGCG AGGATATCAC CCGGTGTCGT CCGGAACACC GGCATATCGG AATTGTCTAT
CAGGATTTCG CTTTATTGCC GCATATGGAT GTGCGCCGGA ACATCGGCTA TGGACTCCGA
CGGCGACTCA GAGGAGAAAC CCTGGACAAC CGAGTCCGGG AAATGGCTGA AGTCCTGCGT
ATCGACCATC TGCTGCACAG GGCTCCCGGA ACCCTGTCCG GGGGCGAAAA GCAACGGGTG
GCCCTGGCCC GGTCGTTGAT TGTCAAACCC CGCCTGCTCT TGATGGACGA GCCTTTTTCG
GCGCTAGATC CCCGGACGCG TCGGAAGTTG CGCCGTCTTT TGCGCCGGGT GATCAAGGAG
ACGGGGACCA CGGTTATCCA TGTGACCCAT GACTTGGACG ATGTTTGGTC TCTGGCTGAC
GAGGTGGCCT TCCTGCGACA CGGACAATTG GTGCAGTCCG GCACCGTGCA GGAGGTCATG
CAACGACCGA GGCGGCGGTG TGTGGCTGAT TTTCTAGGCA TCAATCTTTT CCACGGCCAA
GTCCGGGACC GGAGGGACGG GGTCTGTCGC ATCCAGGCCG GAGAGATGGA ACTGGTCAGC
ACAGACCGGG CGCAACCCGG CGAGGAGGTC CGGGTGGCGA TTCGACCGGA GCAGGTCATC
CTGGCCGAGC GGTGTGAAGG GCCTGTGTCG ACGAGGAACG TTCTGACCTG CAACGTCGTG
GATATTTTTC CGGAAAACGG AGTCTATCTT GTTGAACTTG AACGGGGCGG TTCCCATTTG
AGCGCAGTGG TGACGTATGA CGCGCTGCAG GACCTGAGAC TTGCTCCGGG CAGTGCGGTT
ACAGCACTGA TAAAAAGTAC TCATGTGGCG ATTGTGGGTT AA
 
Protein sequence
MSFLEIRGLS KDLGEFSLKE VDLDLETGTY LAVIGPTGAG KTILLECLVG FYLPEAGHIL 
LEGEDITRCR PEHRHIGIVY QDFALLPHMD VRRNIGYGLR RRLRGETLDN RVREMAEVLR
IDHLLHRAPG TLSGGEKQRV ALARSLIVKP RLLLMDEPFS ALDPRTRRKL RRLLRRVIKE
TGTTVIHVTH DLDDVWSLAD EVAFLRHGQL VQSGTVQEVM QRPRRRCVAD FLGINLFHGQ
VRDRRDGVCR IQAGEMELVS TDRAQPGEEV RVAIRPEQVI LAERCEGPVS TRNVLTCNVV
DIFPENGVYL VELERGGSHL SAVVTYDALQ DLRLAPGSAV TALIKSTHVA IVG