| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dret_1790 |
|---|
| Symbol | |
|---|
| ID | 8419631 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfohalobium retbaense DSM 5692 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013223 |
|---|
| Strand | - |
|---|
| Start bp | 2057799 |
|---|
| End bp | 2058722 |
|---|
| Gene Length | 924 bp |
|---|
| Protein Length | 307 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 645038374 |
|---|
| Product | Radical SAM domain protein |
|---|
| Protein accession | YP_003198652 |
|---|
| Protein GI | 258405910 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG1313] Uncharacterized Fe-S protein PflX, homolog of pyruvate formate lyase activating proteins |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 31 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 29 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCCAGA CTGCGGCGTA TCTGGGGTGC ACTACCACGG CCTTGGCCAC TCGGGAAAAA
CGGTTATGGA GCCTGTTGCG TTCGTGTGTG CTGTGCCCGC ACCGGTGCCG GGTCGATCGT
CTCGCCGGCG AGACCGGCAA ATGCCACACG GGCAGCCGAG CGATTGTCTA CAACTATTTT
CCGCACTTCG GGGAAGAGTC CCCTTTGGTG GGCGACTGCG GATCAGGGGC GATATTTTTT
TCCTTTTGCA ATCTGGCGTG CTGTTTTTGT CAGAATTGGG AGATCAGCCA CGGCGGCGAG
GGACTGGAGC TCCAGAGTGA GCATGTCGCG ACCATGATGC TTGAACTCCA GGCCATGGGG
TGCGCGAATA TCAACCTGGT CACTCCCAGC CATGTTGTCC CCCAGATCGT GACTGCCGTC
CGGCTGGCTC GCGAGCAGGG GCTGCACCTG CCCCTGGTCT ATAATTGCGG CGGCTATGAA
CGGGTGGCCA CCCTGCGGGA ACTCGAAGGA ATAATCGATA TCTATATGCC GGACTTCAAG
TTCTGGTCCT CCGCATCTGC GGCACGGTAT TGCGGGGCTG AGGATTATCC GGAACGAGCC
CGGGCTGCGT TGCGTGAGAT GCACCGGCAG GTAGGGGACC TGAGTATTGA TCGTGACGGA
CTCGCCCGGC GCGGTTTGCT GGTTCGCCAT CTCGTCCTGC CGGGGCTGGA GCAGGAGAGC
GGGGCCATTT TGAAGTTTTT GGCCCAGGAG ATTTCGCAGG AAACCTACGT GAATATCATG
GACCAGTACC GGCCTTGCGG TACAGCCGTG GGGGATCCCA GGCTGGGCGA TGAACTGGAA
CGGGAACAAT GGCTGCGCGT CCTGCGGGCC GCCCGCGCAG CCGGACTGCA CCGGTTTGAC
CACGGCATGA TGTTGTTGTC TTGA
|
|---|
| Protein sequence | MSQTAAYLGC TTTALATREK RLWSLLRSCV LCPHRCRVDR LAGETGKCHT GSRAIVYNYF
PHFGEESPLV GDCGSGAIFF SFCNLACCFC QNWEISHGGE GLELQSEHVA TMMLELQAMG
CANINLVTPS HVVPQIVTAV RLAREQGLHL PLVYNCGGYE RVATLRELEG IIDIYMPDFK
FWSSASAARY CGAEDYPERA RAALREMHRQ VGDLSIDRDG LARRGLLVRH LVLPGLEQES
GAILKFLAQE ISQETYVNIM DQYRPCGTAV GDPRLGDELE REQWLRVLRA ARAAGLHRFD
HGMMLLS
|
|---|
| |