| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dret_1779 |
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| Symbol | |
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| ID | 8419620 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfohalobium retbaense DSM 5692 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013223 |
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| Strand | - |
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| Start bp | 2049947 |
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| End bp | 2051278 |
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| Gene Length | 1332 bp |
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| Protein Length | 443 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 645038363 |
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| Product | peptidase M48 Ste24p |
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| Protein accession | YP_003198641 |
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| Protein GI | 258405899 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG4783] Putative Zn-dependent protease, contains TPR repeats |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.00812626 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAGTCAA ACGCTCCCGA CGTATCGCGT CGGACCATAT TGCACTGGGC GGTTCTGGCC
GCCACCACCC CGGTGTGGTG GACGTTGAGC GGCTGCGCCA CCAATCCGGT GACAGGAGAA
TCAGAATTGA TGCTCGTGTC CCGGGATCAG GAGATCTCCC TGGACCGGCA GAAAAGTCCC
CATCAACTTT CCGCGGATTA TGGGGAAATA CAAAACCAGG AACTCCAAAG GTATATCGCT
TCCGTAGGTC AGGAGTTGGC GGGGCGGACG CACCGGCCGG ACATGCCGTA CCGTTTTTTC
CCGGTCAACG CGGTCTACGC CAACGCCTAT GCCTTTCCCG GCGGTACCAT TGCGGTAACT
CGGGGTATCC TGCTCGAATT GGACAACGAG GCCGAATTGG CGGCTCTCCT CGGTCACGAA
CTTGGGCACG TCAACGCCAG GCACACGGCG GCGAGGATGT CCACCGGGGT TCTTTTGCAG
GGACTTTTGG GAGGTGCCGG CGCTGTGGCC GCCTCCGCTG GCGGGGGGGC TTCGGCCGAG
GCCCTGATGC AGTTAGGCGG CTTGGGAGCC GGAGCGCTGC TGGCCAAATA CAGTCGGGAC
GATGAACGGC AGGCAGACGC CCTTGGTATG CAGTATATGG TTCAAACTGG GTACGCGCCC
CGGGGGATGG TTGGTCTCAT GGATGTCCTG CGCGGTATGT CCTCCCGTAA ACCCTCTGTC
ATCGATCAGA TGTTTTCTTC GCACCCCATG TCCGAGGAGC GGTACCGCAC GGCGGTCAGT
CGGGTTCAAA ATGAGTACCA GACTGGCCGG CAACTGGCGC TGAACCGGGA GCGGTACAAA
GACCATTTGG CGCCGATTCG CGCCATGCAG GAGGCCATTG AGGCCATGCA GGAAGGGGAG
AAAGCCTTGG GCGCGGAAAA TCCCGATCAG GCCGAGCGTT CCTTGCGGCG GGCGTTGCAA
GCCGCCCCTC GGGATTACAC CGCCTTGGTC ATGATGGGCA AATGCCGCTT GCTCCAGGAT
GCCCCGAAAG ATGCGGAGCG CTATTTTACC CACGCGCGGG AGGTTTACCC GCAAGAGCCG
CAGGCAGCGC ATTTTCTGGG GATCACCCTG CTGGGCCAAA AAGAATACGA CGGCGCTTAT
GAACAATTCC GGTGGTATGA AGAGCGACTG CCGGGAAATC CGAACACTAT TTTCCTCCAG
GGATTGGCCC TCGAGGGCGC CCAGCGCCAG CAGCAGGCCG CCGAGGCCTA CGCCCGTTTT
CTGCAAAGCG GCGCCAGCGG GGAGCAGGCC CAATACGCCC GGCAACGGCT CCAGACGTGG
GGCTATCTCT AA
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| Protein sequence | MESNAPDVSR RTILHWAVLA ATTPVWWTLS GCATNPVTGE SELMLVSRDQ EISLDRQKSP
HQLSADYGEI QNQELQRYIA SVGQELAGRT HRPDMPYRFF PVNAVYANAY AFPGGTIAVT
RGILLELDNE AELAALLGHE LGHVNARHTA ARMSTGVLLQ GLLGGAGAVA ASAGGGASAE
ALMQLGGLGA GALLAKYSRD DERQADALGM QYMVQTGYAP RGMVGLMDVL RGMSSRKPSV
IDQMFSSHPM SEERYRTAVS RVQNEYQTGR QLALNRERYK DHLAPIRAMQ EAIEAMQEGE
KALGAENPDQ AERSLRRALQ AAPRDYTALV MMGKCRLLQD APKDAERYFT HAREVYPQEP
QAAHFLGITL LGQKEYDGAY EQFRWYEERL PGNPNTIFLQ GLALEGAQRQ QQAAEAYARF
LQSGASGEQA QYARQRLQTW GYL
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