| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dret_1744 |
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| Symbol | |
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| ID | 8419584 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfohalobium retbaense DSM 5692 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013223 |
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| Strand | - |
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| Start bp | 2007819 |
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| End bp | 2008469 |
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| Gene Length | 651 bp |
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| Protein Length | 216 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 645038327 |
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| Product | thymidylate synthase, flavin-dependent |
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| Protein accession | YP_003198606 |
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| Protein GI | 258405864 |
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| COG category | [F] Nucleotide transport and metabolism |
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| COG ID | [COG1351] Predicted alternative thymidylate synthase |
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| TIGRFAM ID | [TIGR02170] thymidylate synthase, flavin-dependent |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 0.246329 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 0.887681 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGTATTA TCGATCCTTC CGCCGAGATC CTCTCCCTGC AAAATAGTGA CCAGGTCCTG
CGTCTTATCG AACAGGCGGG GCGGACCTGC TACAAGTCCG AACACCGTAT ATCCCAGGGA
ACGGCCGAGG AATTCATCGG TCGAATCATC AATATGGGCC ATGAGAGCGT CATCGAACAC
GGCAGCGCCA CTGTGCGTTT TGTGATCGAT CGCGGTGTCT CCCATGAACT GGTCCGGCAT
CGGCTGGCCT CCTTTTCCCA GGAGTCGACC CGCTACGCGA ACTACGCCAA AGAGCGTTTC
GGCAATGAGA TCACGGTTAT CCGGCCCTGT TTTTGGCAGG AAGGATCAGA GGCCTACCGC
ATGTGGGAAA CGGCCATGCG CGATGCCGAG CGCCATTATC TGGCCCTGAT CGAAGCCGGG
GCCAAGGCGC AGGAGGCGCG CTCGGTGCTG CCCAACAGCC TGAAAACCGA AGTGGTTATG
ACCGCCAATC TCCGGCAGTG GCGGCATGTA TTTCGTCTGC GGTGCGATAG TCCGGCGCAT
CCCCAGATTC GTGAGGTCAT GCTGCCCTTG CTGCACGCCA TGCATGAACG GTTGCCGGTC
GTCTTTGCCG ACCTGGCCGC TCAGTTTCCG CAGATGGGAA CCTCCTGCTG A
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| Protein sequence | MRIIDPSAEI LSLQNSDQVL RLIEQAGRTC YKSEHRISQG TAEEFIGRII NMGHESVIEH
GSATVRFVID RGVSHELVRH RLASFSQEST RYANYAKERF GNEITVIRPC FWQEGSEAYR
MWETAMRDAE RHYLALIEAG AKAQEARSVL PNSLKTEVVM TANLRQWRHV FRLRCDSPAH
PQIREVMLPL LHAMHERLPV VFADLAAQFP QMGTSC
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