Gene Dret_1723 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDret_1723 
SymbolglmM 
ID8419559 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfohalobium retbaense DSM 5692 
KingdomBacteria 
Replicon accessionNC_013223 
Strand
Start bp1984923 
End bp1986275 
Gene Length1353 bp 
Protein Length450 aa 
Translation table11 
GC content59% 
IMG OID645038302 
Productphosphoglucosamine mutase 
Protein accessionYP_003198585 
Protein GI258405843 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG1109] Phosphomannomutase 
TIGRFAM ID[TIGR01455] phosphoglucosamine mutase 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.822287 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTCAGG AGCTTTTCGG AACCGACGGC CTGCGCGGCC AGGTCAATAT CTATCCGATG 
CAACCGGAGA TCGTCCTGCG TCTGGGGCTT GCCGCAGGAC AGTATTTCCG CAACGGGGCC
AAACGGCACC GGGTGGTCAT CGGGAAGGAC ACGAGGTTGT CGGGGTATGT CTTTGAAAGC
GCCTTGACCT CGGGATTTTG CGCCGCGGGC ATGGACGTTT TTCTGGTCGG CCCCATGCCC
ACACCGGCTA TCTCTTTTCT GACCAAGAAT ATGCGTGCCG ATCTCGGCGT GGTCATCTCC
GCTTCGCACA ACCCGTTTAT GGATAACGGG ATCAAGTTTT TTGACAGCGA CGGGTACAAA
CTGGCCGACA GTGTGGAAAA GGAGATCAGC TCTCTGGTCC TCGATCCCTC CACAAACTGG
GAGATCCCGG ATTCGGAACA GATCGGACGG GCCTATAAGA TCCAGGACAG TCCGGGACGC
TATATTGTCG CGCTGAAAAA TTCCTTTCCC CCCCAAATGA CCCTGGACGG GATGAAGGTC
GTGCTCGACT GCGCCAACGG GGCCTCCTAC CGGGTGGCGC CACTGGTACT CGAGGAATTG
GGGGCCAAGG TCGTCAAGGT CGGCAATGAG CCCGACGGGT TGAATATCAA CCGTCAATGC
GGTTCCCTGT ATCCCGAGGT CACGGCCCAG AAAGTGGTCG AGACCGGGGC GGACATCGGG
CTCGCCCTGG ACGGAGACGC CGATCGCTTG ATCGTAGTCG ATGAAAAGGG GCGGATTCTG
GACGGCGACC AGATCATGGC TGTTTGTGCT CGGGATTTTT TGAACAAAGG CGATCTGCCA
GGCAATACCC TGGTGGCCAC GGTCATGAGC AATATGGCCC TCGAGGTCTT TATGCAGGAA
TGCGGTGGCA GGTTGGTGCG CACGCCGGTG GGCGATCGCA ATGTGGTCGA GGCCATGCGA
CACCACGGCA CCATTCTCGG TGGAGAACAG TCCGGCCATC TTATCTTTTT GCGTCACAGC
ACGACCGGTG ATGGTGTTTT GGCCGCCCTG CAACTTTTGC GGATCATGCG CGAACAGGAC
CGTCCCATTT CAGAACTGGC TGGCTTGCTC CAACCGTTTC CTCAGGAATT GATCAATGTC
CATGTCGAAC GCAAAGTGCC GTTTGACGAG GTCCCGGCCG TGCAAAAGGG GGTCACCGAG
GCCGAAAAAC GGTTGGGTGA TCGCGGGCGC GTCTTGTTGC GCTACTCGGG AACAGAGGCT
GTGGCCCGGG TCATGGTCGA GGGCGAAGAC GGGGAACTGG TCGCTTCCTT GGCCGGTGAT
CTCGCCGAAA CGCTTCGGGT CCATCTGCGT TGA
 
Protein sequence
MSQELFGTDG LRGQVNIYPM QPEIVLRLGL AAGQYFRNGA KRHRVVIGKD TRLSGYVFES 
ALTSGFCAAG MDVFLVGPMP TPAISFLTKN MRADLGVVIS ASHNPFMDNG IKFFDSDGYK
LADSVEKEIS SLVLDPSTNW EIPDSEQIGR AYKIQDSPGR YIVALKNSFP PQMTLDGMKV
VLDCANGASY RVAPLVLEEL GAKVVKVGNE PDGLNINRQC GSLYPEVTAQ KVVETGADIG
LALDGDADRL IVVDEKGRIL DGDQIMAVCA RDFLNKGDLP GNTLVATVMS NMALEVFMQE
CGGRLVRTPV GDRNVVEAMR HHGTILGGEQ SGHLIFLRHS TTGDGVLAAL QLLRIMREQD
RPISELAGLL QPFPQELINV HVERKVPFDE VPAVQKGVTE AEKRLGDRGR VLLRYSGTEA
VARVMVEGED GELVASLAGD LAETLRVHLR