| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dret_1720 |
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| Symbol | |
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| ID | 8419556 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfohalobium retbaense DSM 5692 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013223 |
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| Strand | - |
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| Start bp | 1980489 |
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| End bp | 1982825 |
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| Gene Length | 2337 bp |
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| Protein Length | 778 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 645038299 |
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| Product | primosomal protein N' |
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| Protein accession | YP_003198582 |
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| Protein GI | 258405840 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG1198] Primosomal protein N' (replication factor Y) - superfamily II helicase |
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| TIGRFAM ID | [TIGR00595] primosomal protein N' |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.31928 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAAACCT TATGGGATGT CGCCCTGCTT GGGGCTCCCT TTACGACGTT GACCTACACG
CTTCCCGAGG GCTTCCCCCA CTCCCTGTGG CAGCCCGGGC TCCGGGTGTG GGTCCCTGTC
GGGCGTGCGC TGCGCCCTGG CGTTTTGCTC CGTCCCGCCT CGTCCTCCCT TGATCCCGAT
AAACTCAAGC CCCTTTTCTG GCCGCTGGAA CGCGCTCCTT TGCTCTCCCG GGATTATCTG
GAGATGATCG AGGAGATGGC CAAACGTGTC GTGCAGGACT CGGGAGCAAT CCTGGCCGCC
GCTTTGCCTG CCGGACTCCG TAGCGCCAAG GGAGCGCTTG TGGCTGCAGG GAACAAACGA
GAGCGACTTT CGCTTGACGC CCTGCGCCGG CTCTCAGAGA CGGAACGCAA GCGCTGGGCC
GAACTCTGGA GCGAGGGCCA AGCCGAGTGG GTGTTGCACG ACAGCGAACA CCGCGACAGT
CTGCAGTGTT TTGTAAAACA GGATCCCCCC TGGCAGGTCC GCCCGCAAGC AAAGCGCCAG
ATCGCTGTGC TCGATTACCT GTGGGACAAA GGGAGTGTGA ACAGGGGCAG GCTGCGGCAC
GAGCTTGGTA ATTGGGCCGG CCCGGTCCTT GACACCTTGT GCGATAAGGC GTTGGTGGAG
GTCGCTGCTC CGGAGGAATG CGAGCCAGAC TCGTGCTCGG TCGCCTCAGG GCTGGAAGAT
CTGGTCCTGA GTGCGGAGCA GAGCCGAGCC CTGGAGGGAT TGCGCCATGC CGCGACCCAG
CACCAGGCGG CCCTGGTCCA CGGAGTGACC GGCAGCGGCA AGACCGTTGT CTATGCCCAT
CTCGCCCGGG AGTGGCTGGC GGGCGGGCGC AGTGTCCTCT TGCTGGTCCC AGAGGTGGCC
CTGGCCCGGC AGACCCTGGC GGCAGTGCGC CATTTCCTCC CTGGTGAGAG GGTGTATCTC
TACCACGGCT ACCAGTCCCC CAAACAGCGG GAAAAGGTCT TTACCGAACT TGCCGGGCGC
GATGAGCCGT GTGTAGTCGT CGGAACCCGT TCCGCCCTGT TTTTGCCCCT GCGTGACACC
GGCCTTGTGG TCCTGGACGA AGAACATGCC GAGTCGTTTA AACAGGATGA GCGCTTGGTC
TATCAGGCCA AGGAACTCGC CTTTTTCCGG GTGCGACAGA GTCAGGGGTT CCTGGTCCTC
GGCTCTGCCA CACCGGATCT GAAGACTTTT TCCGCAGCTC GGGAAGAGCG GCTGCCCAAG
GTGACCCTCC AGGAGCGGGT CGGTGCCAGC CAGCTGCCGG AGATCGATCT CGTTGATCTG
CGTGAGGAGC CACCGGTTGC CGGTCCTTTT GCGGCCTCGG TCCACCAGCG TTTGCAGGAG
GTCCTTGAGC GCGGCGAACA GGCAATTATC ATGCACAACC GGCGCGGCTA TGCCCCTTTG
GTTTACTGCA CCGGTTGCGG CGAAGTGGCC CGGTGTCCGG ATTGTGAGGT GGGGTTGACC
TACCACAAGC GGCGCCAGCG GCTTGTCTGT CATTATTGCG GTCAGCACAA AGAGTTTCCT
TTTGTATGTC CGAAATGTCG CGCCAGCCAG TTCGTCCCCA TTGGCGAGGG GACCGAACTC
ATTGAGGAAT ACTTGTCGAC CTCGTTGCCG GCCGGGGTGC GGGTAGATCG TCTCGATCGC
GACAGCACCC GGCGGCAAGG GCGGCTGGAG GAGATCCTGG CCGCATTCAG CCGCGGGGAG
TCGCAGGTGC TCGTTGGGAC CCAGATGCTG AGCAAGGGCC ACCATTTTCC CGGGGTAACC
CTGGCGGTGG TCGTGGACGG CGATCTGGGG CTCAATCTGC CCGATTACCG GGCAGCGGAG
AGGACGTTTC AGATGCTCGT CCAGGTTGCC GGCCGTGCGG GGCGGGGGGA CAAACCAGGC
CATGTCCTGA TTCAGACCCG GGATCCGGAG CATTATTGTT GGGAATTTGT CCGGCGCGGC
GATTATGAAG GGTTTTTCGA GCGTGAAGCC GCACTGCGGC AGCGGCTGTC CTATCCGCCG
TATACCAAGT TGGCCTTGGT GCGTTTCAGC CTCCCGACTG AATGGGAGCA AGGGGCGGAA
ACGATTAGGG AAGTAGGGCG ATTTCTCAGG CAGGCCGGCA AGGCCGCTGG ATTACGCGTA
CTCGGTCCTG CTCCGGCCCC TTTGGGACAA TTGCGGGGGC GGCTACGGTA CCATTGCCTG
CTCAAAGGGG AATCCTGGCA GGAGATGCGC ACGGTGTATC AGCAGGTGCG GCACCGCTTT
TTTCGCGTCC GGCAACTTCG AATACAACTC GATCTTGATC CAGTGCACAT GATGTGA
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| Protein sequence | METLWDVALL GAPFTTLTYT LPEGFPHSLW QPGLRVWVPV GRALRPGVLL RPASSSLDPD
KLKPLFWPLE RAPLLSRDYL EMIEEMAKRV VQDSGAILAA ALPAGLRSAK GALVAAGNKR
ERLSLDALRR LSETERKRWA ELWSEGQAEW VLHDSEHRDS LQCFVKQDPP WQVRPQAKRQ
IAVLDYLWDK GSVNRGRLRH ELGNWAGPVL DTLCDKALVE VAAPEECEPD SCSVASGLED
LVLSAEQSRA LEGLRHAATQ HQAALVHGVT GSGKTVVYAH LAREWLAGGR SVLLLVPEVA
LARQTLAAVR HFLPGERVYL YHGYQSPKQR EKVFTELAGR DEPCVVVGTR SALFLPLRDT
GLVVLDEEHA ESFKQDERLV YQAKELAFFR VRQSQGFLVL GSATPDLKTF SAAREERLPK
VTLQERVGAS QLPEIDLVDL REEPPVAGPF AASVHQRLQE VLERGEQAII MHNRRGYAPL
VYCTGCGEVA RCPDCEVGLT YHKRRQRLVC HYCGQHKEFP FVCPKCRASQ FVPIGEGTEL
IEEYLSTSLP AGVRVDRLDR DSTRRQGRLE EILAAFSRGE SQVLVGTQML SKGHHFPGVT
LAVVVDGDLG LNLPDYRAAE RTFQMLVQVA GRAGRGDKPG HVLIQTRDPE HYCWEFVRRG
DYEGFFEREA ALRQRLSYPP YTKLALVRFS LPTEWEQGAE TIREVGRFLR QAGKAAGLRV
LGPAPAPLGQ LRGRLRYHCL LKGESWQEMR TVYQQVRHRF FRVRQLRIQL DLDPVHMM
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