Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dret_1719 |
Symbol | asnC |
ID | 8419555 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfohalobium retbaense DSM 5692 |
Kingdom | Bacteria |
Replicon accession | NC_013223 |
Strand | - |
Start bp | 1978983 |
End bp | 1980374 |
Gene Length | 1392 bp |
Protein Length | 463 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 645038298 |
Product | asparaginyl-tRNA synthetase |
Protein accession | YP_003198581 |
Protein GI | 258405839 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0017] Aspartyl/asparaginyl-tRNA synthetases |
TIGRFAM ID | [TIGR00457] asparaginyl-tRNA synthetase |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.00602659 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 0.38448 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGAGCGAA CTCGTGTGGT GCAGGCCTTG CGCTCCACCG CCCCGGTGGA CGATATCCAG ATTATGGGCT GGGTGCGTAC CAAAAGGGAT TCGAAGCAAT TCACCTTTTT GGAGGTCAAT GATGGCTCGT GCCTGAAAAA TATCCAGGTC ATCGTGGACA GCGATGTCCC GAGTTATTCG GAGTTGGAAG GCATCAACAC CGGGGCTTCC GTCCGTCTCC GGGGCAAACT GGTCGAATCA CCCGGCAAGG GGCAGAAATG GGAGGTCCAG GCCACTGAAA TTGCCCTGAT CGGCGCAGCG GACCCAGAAG GATACCCTTT GCAAAAGAAA CGCCATTCCG ACGAGTTCCT GCGGACCATC GCCCAGTTGC GCCCCCGGAC CAATAAATAC GGGGCGCTGT ACCGTATTCG GGCCGAACTC GCTCAGGCCA TTCACCGCTT TTTCCATGAA CGAGGTTTTT ACTACGTCCA CACGCCAATT ATTACCGGTT CTGATTGCGA AGGGGCTGGA GAGATGTTCC AGGTGACCTC CCTGGACATG AACACGCCGC CGCGTGCAAA CGGCCAAGTC GACCATAGCC AGGATTTTTT CGGGCAATCA GCCATGCTGA CGGTTTCTGG CCAGTTGTCT GCCGAAGTGT TGGCCTGTTC GCTAGGCAAT GTGTATACTT TTGGGCCGAC TTTCCGGGCC GAAAATTCAA ATACACCACG CCATGCCGCG GAATTCTGGA TGGTCGAGCC GGAGATGGCC TTTGCCGACC TCAAAGACGA CATCGATCTC GCCGAGGCCT TTCTCCAATA TCTCGTGACC CATATCCGGG AGCACTGTTC CGAGGATCTG GACCTCTTTA CCCGCTTTGT GGACAAGGAA TTGTCGGCTA CGCTGGATAA TATCGCGGAA AACGCCTTTG TCCGTCTGCC GTACCGTGAA GCGGTGGAGA TCCTGCAAAA AGCCCGGCCC AAGCAGGCCT TTGAGTACGA GCCCACCTTC GGCGAGGATC TGCAGACCGA GCACGAGCGG TACTTGACCG AAACCCATTT CCAAAAACCG GTTGTGGTCT ACGATTACCC GAAATCCATC AAGCCGTTTT ACATGCGGGT CAATGATGAC CAGGAGACTG TGGCGGCCAT GGATGTCCTC GTGCCGCGGG TCGGAGAGAT TATTGGCGGC AGCCAGCGTG AAGAGCGGCT GGAGGTCCTC GAGGGCCGGA TCGCGGATAT GGGCCTGCCC CGTGAGGAAT ATGAATGGTA TCTTGATCTC AGGCGCTACG GGACAGTGCC CCATGCCGGG TTTGGGATGG GCTTCGAGCG GGTGCTCATG TTCCTGACAG GAGTGGGCAA TATCAGGGAC GCGGTCCCTT TTCCCCGGAC CCCCGGGCAT CTCCATTTCT AG
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Protein sequence | MERTRVVQAL RSTAPVDDIQ IMGWVRTKRD SKQFTFLEVN DGSCLKNIQV IVDSDVPSYS ELEGINTGAS VRLRGKLVES PGKGQKWEVQ ATEIALIGAA DPEGYPLQKK RHSDEFLRTI AQLRPRTNKY GALYRIRAEL AQAIHRFFHE RGFYYVHTPI ITGSDCEGAG EMFQVTSLDM NTPPRANGQV DHSQDFFGQS AMLTVSGQLS AEVLACSLGN VYTFGPTFRA ENSNTPRHAA EFWMVEPEMA FADLKDDIDL AEAFLQYLVT HIREHCSEDL DLFTRFVDKE LSATLDNIAE NAFVRLPYRE AVEILQKARP KQAFEYEPTF GEDLQTEHER YLTETHFQKP VVVYDYPKSI KPFYMRVNDD QETVAAMDVL VPRVGEIIGG SQREERLEVL EGRIADMGLP REEYEWYLDL RRYGTVPHAG FGMGFERVLM FLTGVGNIRD AVPFPRTPGH LHF
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