| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dret_1702 |
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| Symbol | |
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| ID | 8419533 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfohalobium retbaense DSM 5692 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013223 |
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| Strand | + |
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| Start bp | 1958602 |
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| End bp | 1960152 |
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| Gene Length | 1551 bp |
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| Protein Length | 516 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 645038276 |
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| Product | carbohydrate kinase, YjeF related protein |
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| Protein accession | YP_003198564 |
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| Protein GI | 258405822 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0063] Predicted sugar kinase |
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| TIGRFAM ID | [TIGR00196] yjeF C-terminal region, hydroxyethylthiazole kinase-related
[TIGR00197] yjeF N-terminal region |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.214184 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.051973 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTACATTC CCCTGCCAAC GCCGGACGAA ATGGCCCTTT GGGACCGAAC CAGCATCGAC
ACTTACGGCA TTGACGCCAA AATGCTCATG GAAAACGCGA GCCGCGAGGC TCTGCATGTC
CTGCTCGAGG AATTCGGATC CTTACAGGGG AAATCCGCTG TGGTCTTTGC CGGTTCCGGG
AACAATGCCG GCGACGCTTT TGCCCTGGCC CGGCATATGA CCGACATGGG CGCGAAGGTG
ATGGTCCTGC ACAAAAAGGC GCAACAGGAA TACACCCGGG AAACCGCCTA CCACCTCCAG
TTGGCCTTGA ATACCGAGGT TCCCCTGGTG CGGTTGCCGG AATACAACCT CGATTTCTTG
ACCCATCCCG ACATCGTGGT CGACGGCCTG CTCGGCACTG GGTTCCGGGG CCTGCTCAAC
AAGCAATACA AAGACTGGAT CAACCATATC AATCGCATGG GGAAAAACAG CTTTGTCTTT
GCCCTGGACA TCCCCTCCGG GATCAATGGC TGGACCGGCC TGCCGAGCCC GACCGCGGTC
AAAGCCGACG CCACCGCCAC ATTTGCCTTT GCCAAAGTCG GCTTATTCAT GGCTGAAAGC
CGCCCCTATG TCGGCAACCT CCATGTCCGC TCCATCGGCT TGCCCGCCCG GGTTTCAGAA
GACGCCCCGC CCAGTCATTT CGGCCTCGAC CAGCACATTC TCTCCTTGTA CCCCGCTCCG
CAGGACGACC TGCACAAGGG AACGGCCGGA CATGTTCTCA TCGTCGGCGG CTCTGAAGGA
CTGACCGGCG CCCCCCATCT GGCCGCCCTC GGCGCCCTTC GCGGTGGCGC AGGTTTGGTG
ACCATCGCTA TTCCGGGGGC GCTGGCTTCC GAAGTCAAAA ACGGCGCAGC GGACATCATG
ACCCTGCCCC TTGGTGAGGG AGGCAAATGG AGCGGATCCC TCATTGAGGC TTTGAGTCCC
CATTTCGAGC GCTTTGACAG CGTGGTCATC GGCCCGGGGC TGGGCCGCGA CACTGGGAGC
CGGAATTTCC TCCGTGCCTA CCTCCAGAGC GAACACCCCC CGACGGTCAT CGATGCCGAC
GCGCTGTATT GGCTGGCCGA GGATCCACAA TGTGTCCAAC ATCTGGATCA GGAATGCATC
CTGACGCCCC ACCCCGGGGA AATGGCACGG CTGTGCCGGA AATCCAACAA TGAAGTCCAG
CAAAACCGAC CAGCTATCCT GCGCCAGGCC GTGCAGGATT TCCAGTGCAC TATGGTCTTC
AAAGGGGCCA ATACATTGAT CACTGCGCCC AACCGGCCCA TGTACGTCTC CCCCATCGCC
TGCGCCAACC TGGCCATCGG CGGCGCTGGC GACATCCTGG CCGGTCTGAT AGGCAGCTTA
CGCAACAGCT CCCTTTCCCC CTTGCAGGCC ACCTGCCTCG GCGTGTATTG GCATGGTTTC
GCCGGCGAAC TCCTCCGGGA GAGATACCCC TACAGAGGCA ACCGAGCCAC GGAGTTGGCC
GACATCCTGC CCCTCGTTTT TAAGGAGACA CACGATGCCC ACAGTTGCTG A
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| Protein sequence | MYIPLPTPDE MALWDRTSID TYGIDAKMLM ENASREALHV LLEEFGSLQG KSAVVFAGSG
NNAGDAFALA RHMTDMGAKV MVLHKKAQQE YTRETAYHLQ LALNTEVPLV RLPEYNLDFL
THPDIVVDGL LGTGFRGLLN KQYKDWINHI NRMGKNSFVF ALDIPSGING WTGLPSPTAV
KADATATFAF AKVGLFMAES RPYVGNLHVR SIGLPARVSE DAPPSHFGLD QHILSLYPAP
QDDLHKGTAG HVLIVGGSEG LTGAPHLAAL GALRGGAGLV TIAIPGALAS EVKNGAADIM
TLPLGEGGKW SGSLIEALSP HFERFDSVVI GPGLGRDTGS RNFLRAYLQS EHPPTVIDAD
ALYWLAEDPQ CVQHLDQECI LTPHPGEMAR LCRKSNNEVQ QNRPAILRQA VQDFQCTMVF
KGANTLITAP NRPMYVSPIA CANLAIGGAG DILAGLIGSL RNSSLSPLQA TCLGVYWHGF
AGELLRERYP YRGNRATELA DILPLVFKET HDAHSC
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