| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dret_1666 |
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| Symbol | |
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| ID | 8419497 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfohalobium retbaense DSM 5692 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013223 |
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| Strand | - |
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| Start bp | 1918519 |
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| End bp | 1919229 |
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| Gene Length | 711 bp |
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| Protein Length | 236 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 645038240 |
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| Product | HAD-superfamily hydrolase, subfamily IA, variant 1 |
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| Protein accession | YP_003198528 |
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| Protein GI | 258405786 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0546] Predicted phosphatases |
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| TIGRFAM ID | [TIGR01549] haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 0.695428 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGTGCTT ATGCTGCTCA GTCCTGTGGA ATGGATCGGT TGCGTCCGAC CCTGTATTGC
AATCCGCTCT TGCCCGAGAG CTATTTCGCG CCGATCCGGG GCATCATTTT CGACTGCGAC
GGCGTGCTCA TCGACTCCAA ACAGGCCAAT CTGGCCTTTT ACAACCGCTT GCGCCATGCA
GTGGGGCTGC CTTCGATGTC CAAGGCCGAG GAGGAATATG TCCACAGCCA CACTGTGGCC
CAGTCCCTGG CTCATATTCT GCCCCCCGAA GCCCAGGACC ACGTCGCTGA ACTGCGCAGC
CAGATCCGGT ACAAGGATCT CGTGCCGTAC ATCTCCATCC AGCCCGAGCT GATCCCCTTT
CTCGAGTTCC TGGCCTCCCG CGGCATCCGG ATGGCGGTCA ATACCAACCG TACGGACACA
ATGGGTCTTA TCCTGCAACT GTTCGACCTG GAGCGGTTTT TCTTTCCGGT CATGACCTCC
AGCCAGGTTT CGTGGTCCAA GCCGCACCCT GAGAGCATGT ACCGCATCCT CAATGATTGG
CGATTGGGGG CGAAGGACGT GGTCTATATC GGCGATTCCG AGGTTGACGC CCGGACTGCC
CACGCCGCCT CTGTCCCGTT TTGGGCCTAT CAGGACCCGA CACTGCCCGC AGATATGTAT
GTCCCGGATT TCGGGTGCCT GCGTCAGGTT ATGGCTCTGA ATCTGTCGTA A
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| Protein sequence | MRAYAAQSCG MDRLRPTLYC NPLLPESYFA PIRGIIFDCD GVLIDSKQAN LAFYNRLRHA
VGLPSMSKAE EEYVHSHTVA QSLAHILPPE AQDHVAELRS QIRYKDLVPY ISIQPELIPF
LEFLASRGIR MAVNTNRTDT MGLILQLFDL ERFFFPVMTS SQVSWSKPHP ESMYRILNDW
RLGAKDVVYI GDSEVDARTA HAASVPFWAY QDPTLPADMY VPDFGCLRQV MALNLS
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