Gene Dret_1661 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDret_1661 
SymbolilvH 
ID8419492 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfohalobium retbaense DSM 5692 
KingdomBacteria 
Replicon accessionNC_013223 
Strand
Start bp1915259 
End bp1915747 
Gene Length489 bp 
Protein Length162 aa 
Translation table11 
GC content56% 
IMG OID645038235 
Productacetolactate synthase 3 regulatory subunit 
Protein accessionYP_003198523 
Protein GI258405781 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0440] Acetolactate synthase, small (regulatory) subunit 
TIGRFAM ID[TIGR00119] acetolactate synthase, small subunit 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value0.994692 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGACACA CCTTATCAGT GCTGGTGGAG AATGAGCCCG GAGTCTTGTC TCGCGTGGCC 
GGATTGTTCA GTGGCCGAGG GTTTAACATC GAATCGCTGA ACGTGGCCCC GACCCTGGAA
GAAGGGATTT CTCTTATGAC CATCACCACC CGGGGTGATG AGCAGATCAT CGAACAGATC
ATCAAGCAGT TGCGCAAGCT GGTCACGGTC ATCAAGGTCG TCGACCTGGC CTTGGAGCAG
GCTGTGGACC GGGAGATGGT CTTGTTGAAG ATCAACGCCG AAGGCCAGTC CCGGCCAGAG
ATCTTGCGCA TCGTCGATGT TTTCCGGTGC AAAGTCGTTG ACGTGAGCCC TACGGAACTC
GTCGTCGAGG TTACCGGAGA CCAGGGCAAG ATCAAGGCCT TGATCAACCT TATGCAACGT
TTCGGAATCA AGGAGATTGC CCGGACTGGA AGCGTGGCCA TGCGCCGCAG CATGCAACTC
GAGGATTAG
 
Protein sequence
MRHTLSVLVE NEPGVLSRVA GLFSGRGFNI ESLNVAPTLE EGISLMTITT RGDEQIIEQI 
IKQLRKLVTV IKVVDLALEQ AVDREMVLLK INAEGQSRPE ILRIVDVFRC KVVDVSPTEL
VVEVTGDQGK IKALINLMQR FGIKEIARTG SVAMRRSMQL ED