| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dret_1657 |
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| Symbol | |
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| ID | 8419488 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfohalobium retbaense DSM 5692 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013223 |
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| Strand | + |
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| Start bp | 1909546 |
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| End bp | 1910259 |
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| Gene Length | 714 bp |
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| Protein Length | 237 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 645038231 |
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| Product | TonB family protein |
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| Protein accession | YP_003198519 |
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| Protein GI | 258405777 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0810] Periplasmic protein TonB, links inner and outer membranes |
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| TIGRFAM ID | [TIGR01352] TonB family C-terminal domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.107478 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCGGTT GGGCGCGCCG CACCGGGCTT GTCCTTTTGG CTCTGGCGGT CAATGCCCTG
TTGTTCGGGA CTATTCCCTA CTTGACTCAG GTCCAGGATC AACGTTTACG CTCCCGGCAA
CACCACGACC CACCCCAGGT CCACCACCAG GTCACGCTCG AGCCCGAGCC GGCCGATCCA
GCTCCGGACG CCTCGTCAAA GCCCCAGGAG ACTCCCTCCC CAGCTGCGGC CCCATCACCA
GCGCCCCAGA TGCCTGAGGC CGCGCCTTCG CCCCGGCCCC AGACGCAGTC CTCGCCCCGT
ATTCAGCGTC CTGCGCTGGA CTTGCCCGCT CCGCAATGGG AACCGTCAGC AATCACGCTC
CCCAAGCCGT CTCCTTCCGA AAGGGGCCCC AAATCGCCGG GTTCCGGGTC ACCTCTCGAG
GCCCCTGCCC TGGACCGGCA GCCGCGCCTG GTCAGCCATC TCCGGCCTGT CTATCCCTAT
AAGGCCCGTC GCCAGGGGCT AAACGGCACG GTTGTTGTCG AGGTGCTCGT CTCCGCCAAG
GGCCGAGTCG CCAAGGCCAG GGTGGTCCGG GCGACTCCCG AGAACGTTTT TGAAGACAGC
GCCCTGAAGG CGGTGCGGCA ATGGCGGTTT GCCCCGGCAA CAGCCAACGG AAAACCGGTA
CGGGCCAGAG TCCGCATCCC GATCCGTTTT TCACTGGAAA ACCAGAACCC TTGA
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| Protein sequence | MSGWARRTGL VLLALAVNAL LFGTIPYLTQ VQDQRLRSRQ HHDPPQVHHQ VTLEPEPADP
APDASSKPQE TPSPAAAPSP APQMPEAAPS PRPQTQSSPR IQRPALDLPA PQWEPSAITL
PKPSPSERGP KSPGSGSPLE APALDRQPRL VSHLRPVYPY KARRQGLNGT VVVEVLVSAK
GRVAKARVVR ATPENVFEDS ALKAVRQWRF APATANGKPV RARVRIPIRF SLENQNP
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