Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dret_1639 |
Symbol | |
ID | 8419470 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfohalobium retbaense DSM 5692 |
Kingdom | Bacteria |
Replicon accession | NC_013223 |
Strand | + |
Start bp | 1887366 |
End bp | 1889159 |
Gene Length | 1794 bp |
Protein Length | 597 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 645038213 |
Product | Cl- channel voltage-gated family protein |
Protein accession | YP_003198501 |
Protein GI | 258405759 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG0038] Chloride channel protein EriC |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 32 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGTTTTC TCTCTTTCCT GCACTCCTTG TGGACCCGCT GGCGCCCCCC GTTTTCCGGG GCCCAACCCC TGGACATCTC TCTGCTCGGC TTTGCCGTGG CCATCGGGTT TCTGGCCGCG GTCGGAGCCT TGTTGTTCCG GTCCTGTATC GAAGGGTTCC AATTCCTTTT GTGGCCCGGC GGGGCCTCCC TCGTCGAACA GGTCCAGGCC GCGCCGTGGT GGATGGTCCT GCTCGTACCG ACCCTGGCCG GACTCGTCGT CGGACCGGTT ATTGCCTTTT TTGTCCCCGA GGCCCGGGGC CCGGGGGTAC CGGAAGTCAT CCTGTCGGTA ACCACCCGGC AGAGCACCAT CCGCCACCGG GTGACCTTCC TCAAGGGATT GATCACCAGC CTGCTGCTGG CTGCCGGCGC CTCGGTCGGC CGCGAAGGTC CCATCGTCCA AATCGGATCC TCGGTCGGGT CCTCACTGGC CCAATTCTTC GGTCTGCGCC CGGAACTCAG ACGCCTCTGC CTCGCCTGCG GCGCGGCCGC CGGTATAGCG GCGACCTTCA ACGCCCCCAT CGCCGGTTCC CTGTTCGCCC TGGAGATCAT CCTCATGAAT ATCGAGGTCT CCTACATCAG CCACATCGTG ATCGCCGCCA TCACCGGCTC GGTGCTCTCC CGGATCTTCT GGGGCGACTT TCCGGCCTTC CGCGTCGTGC CGTTTGAACT CGGCAGCTAT TCGGAATTGC TCGGTTATCT CGTGCTGGGG ATCCTCGCCG GTCTGGTGTC CATCGTCTTT GTGCGCAGCA TTTTCGCCAC GGAAAACATC TTCCAACGCT TGCGCCTGCC CCAATGGCTC TCCCCGGCCA TCGGCGGGCT GCTTTTGGGC TGTCTGGCCC TGAGCCTGCC CCAGGTCATG GGCGTGGGCT ATGAGACGGT CAACGACGCC CTGGCCAACT CACTGCCGCT GCAAATGGCA CTGGTCCTTC TGGCCGCCAA ACTGGCGGCC ACCGCCATCT GCATCGGCTC GGGCATGAGC GGCGGCATCT TCGCCCCCTC GCTTTTTCTG GGGGCGGCGC TGGGCACCGT AGTCGGGCTT GGGGCCACTG TGGTCTGGCC GGCCCATGAT CTCCACCCGG CCTTCTTTGC CCTGGCCGGC ATGGGTGCGG TGGTTTCGGG AACGACACTG GCCCCGATCA CCGCGATTGT GACCATTTTC GAACTCACCC TGCACTATCA GATCATTTTG CCGCTGATGG TCGCCTGCAT AAGCGCGACG CTGGTGGTCC GCTTGTTGTT CGGGGTCTCC GTCTACGAAC TCAAGCTTTT GCGCAACGGC ATGGACATTG TCCGCGGCCA CGACGTCGGC ATTCTGCGCA ATCTCTGCGT CTGCGACGTC ATGCGCCGCA GTGTGCCCCG GCTGCCCATC ACCGCGACCC TGGGAGCGAT CGTGGCGGCC ACGGAGCAAA CCGCCTTTCC CCACTTCGTG GTCGAACAGG AGCAGAACAA ACTCGCCGGT GTGCTCTCCC TGCGGGACCT GCGCAAGGCC CTGCTCCAAT TCGAGGCCAA CAAGGACCAC CTGAGCGCGG GGGACCTGAT GAGCCGGAAT GTGATCACCG TCGAGCGCAA CGACAGCGTC GAGAAAGCCC TGCACCTTTT TGAGGAATAC CACTACTCCA TGTTTCCGGT CGTGGACCAG GACAACACCG TTGTCGGCAT TCTGACCAAG GACGATGTCC TCAAAGCTTA CGACCAGAAA GTGCTCAAGG ACCGCGTCCT GTCGACCCAG ACCGGTCACG GCGAATCCGC CTAG
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Protein sequence | MRFLSFLHSL WTRWRPPFSG AQPLDISLLG FAVAIGFLAA VGALLFRSCI EGFQFLLWPG GASLVEQVQA APWWMVLLVP TLAGLVVGPV IAFFVPEARG PGVPEVILSV TTRQSTIRHR VTFLKGLITS LLLAAGASVG REGPIVQIGS SVGSSLAQFF GLRPELRRLC LACGAAAGIA ATFNAPIAGS LFALEIILMN IEVSYISHIV IAAITGSVLS RIFWGDFPAF RVVPFELGSY SELLGYLVLG ILAGLVSIVF VRSIFATENI FQRLRLPQWL SPAIGGLLLG CLALSLPQVM GVGYETVNDA LANSLPLQMA LVLLAAKLAA TAICIGSGMS GGIFAPSLFL GAALGTVVGL GATVVWPAHD LHPAFFALAG MGAVVSGTTL APITAIVTIF ELTLHYQIIL PLMVACISAT LVVRLLFGVS VYELKLLRNG MDIVRGHDVG ILRNLCVCDV MRRSVPRLPI TATLGAIVAA TEQTAFPHFV VEQEQNKLAG VLSLRDLRKA LLQFEANKDH LSAGDLMSRN VITVERNDSV EKALHLFEEY HYSMFPVVDQ DNTVVGILTK DDVLKAYDQK VLKDRVLSTQ TGHGESA
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