| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dret_1622 |
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| Symbol | |
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| ID | 8419453 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfohalobium retbaense DSM 5692 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013223 |
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| Strand | + |
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| Start bp | 1869714 |
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| End bp | 1872056 |
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| Gene Length | 2343 bp |
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| Protein Length | 780 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 645038196 |
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| Product | CRISPR-associated helicase Cas3 |
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| Protein accession | YP_003198484 |
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| Protein GI | 258405742 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1203] Predicted helicases |
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| TIGRFAM ID | [TIGR01587] CRISPR-associated helicase Cas3
[TIGR02621] CRISPR-associated helicase Cas3, Anaes-subtype |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGACTTCA CTTCACTCTT CAAGCAAACA GTTGGGAATG ATCTACATCC CTACCCCTAC
CAGGTAGCCC TTGCCCATCG AGATTGGCCG GACATAGTCG ATATTCCCAC TGGGTTGGGG
AAAACCGCTG CTATCATAAC AACCTGGATT TATAAGCGAT TGCAGCAAGA CCCTCAGACA
CCCCGCCGGT TGGTGTATTG CCTACCTATG CGTGTACTGG TGGAACAAAC GGCGGCACAT
GCTGAGCAGT GGGTCAATGC TCTGACGGAA CAACATATTT ACACCGAGGC AAGTCGGCCC
TTGGTCCATT TATTAATGGG GGGAGACGTC GATCAAAACT GGGATGCCAT GCCCGAGCGC
GATCAAATAC TTATCGGCAC ACAGGATCAG CTTCTCTCCA GAGCCCTTAA CCGTGGGTAT
TCCATGAGCC GCTTTCGCTG GCCCGTACAC TTTGGATTAC TAAACAATGA CTGCTTATGG
GTGATGGATG AAATCCAACT CATGGGAGAG GGCTTGGCTA CAACCGCACA ACTTCAAGCC
TTTCGTGAGC ATTTCCAGTC CGCATTCCCA GTTCGTTCAG TCTGGATGAG TGCCACCTTA
CGTCCAAGCT GGCTATCGAC AATTGATTTC TCTCCACGTG TGGATTCTTT AGTTTCTCAA
TCATTAAGCG AATCAGACCT TACACATAGC GCTGTCACAA AGCGGCTTGA AGCCTCCAAG
CCGCTTGAAA AGGCTCCGTG CAGCTCAAAC GAGCCCAAAA AATTGGCGCA ATTCGCTCTG
GAATGCCACA AAGCTGGCAC TCGCACCCTG GTAGTTCTCA ACACAGTCAA ACGGGCCCAA
GCCCTTTTCC AACATCTCAA AAAACATAAA CCTAAATGCG ATCTCGTACT GATTCATTCG
CGATTCCGGG CCCAGGACAA AGCCCATGCT ATCGAGAAAC TCCTTTCCCC GGTCAACGAG
CAGGGGACAA TCTGTGTAAC CACCCAAGTC ATTGAAGCCG GTGTCGATGT CAGCTCTAGT
ACCCTGATCA CGGACTTGGC CCCGTGGGCT TCATTGATCC AGCGTTTTGG ACGCTGTAAC
CGTGATGGCC ATGAAAACGA CGCCAAAATA TACTGGCTAG GTCTGGATAT AACCAAAAAG
GGGCACTCTG CTCCCTACAA AGCAGATGAA CTTCTGAAGG CCACCCATAT TCTCGAAAGT
CTGCTTAATG CAAAACCCTC CACACTACCC GCCCCCAATA ACGACCCACA ATATCTGCAC
GTATTGAGAA AAAAGGACCT TGTAGACCTT TTCGATACTA CCCCGGACAT TGCCGGTGCG
GATATCGATG TCTCACGCTT TATCAGGGAT GTAGACGATT ATTCCCTCCA AGTCTTTTGG
CGCTATTTGG ACGGAAAGGA ACCCTCAGCG CTCGAGCCCG CTCCCGCCAA ACAGGAGCTT
TGCAATGTTC CAATTACTTC GCTACAAAGT GCTCCTGACC TCAAAAAATG GAGATGGGAT
TATTTGGAAA AAGAGTGGCA ACGCATATGG AGAAATGAAG AATTGTACCC TGGTTTAACC
ATCCTCTTGG ATACTGCCGC AGGGGGGTAT AGCGCTGAAC TCGGATGGAC TGGCAATAAA
AATGATGTGC CCGCCCCTCT ACCGACCAGG GAAAAACCAT TCGAAGCGCA TGACGATGAC
ACTATTACCT CCATGGGCTG GCAGACGTTA TCTGACCATG TTCAGGCTGT GGTCAACGAA
TTGGATTTAC TTCTCGATTG TCTACCCCTT GATGATTATG AAAGCATAGA AGCCCTGAAA
CTTGCCGCCC GTTGGCACGA TTCGGGGAAA GCCCATCCAG TTTTCCAGGA AGCCATGGTT
AAAAACACTA CACCTCCAGA ACAAAACAAG CTTTGGGGAA AAACCTTCTT GGGGAATGTA
ACGTATTCCC GTAGAGGATT CAGGCATGAA CTCGCTTCAG CCCTTGCAAT GATCGAAAAC
GGTTTACCTG ACTTGGCTGT TTATTTGGCT GCTGCCCACC ATGGAAAGCT CCGTTTAACA
ATCAGGTCCC TACCCAACGA AACTAAGCCC GATCAAATGG AAAAACGCTT TGCCAAAGGG
ATATGGGATG GAGATGTACT ACCGGAGGCA GAGCTTGGTA ATGGCACGGT CATGTCGGAA
ACAACACTGG ATCTCTCGGT TATGGAATTG GGGGAAGGAG CTAAAGGTCC AAGTTGGCTG
TCTCGCACGC TGAAACTAAG AGACAGCCAA CGTCTGGGAC CTTTTAAGCT GGCATATCTT
GAAGCTCTGC TCAGGATTGC CGATTGGCGT GCAAGCAGGA ATCAGGACTC TAGTCATGCA
TGA
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| Protein sequence | MDFTSLFKQT VGNDLHPYPY QVALAHRDWP DIVDIPTGLG KTAAIITTWI YKRLQQDPQT
PRRLVYCLPM RVLVEQTAAH AEQWVNALTE QHIYTEASRP LVHLLMGGDV DQNWDAMPER
DQILIGTQDQ LLSRALNRGY SMSRFRWPVH FGLLNNDCLW VMDEIQLMGE GLATTAQLQA
FREHFQSAFP VRSVWMSATL RPSWLSTIDF SPRVDSLVSQ SLSESDLTHS AVTKRLEASK
PLEKAPCSSN EPKKLAQFAL ECHKAGTRTL VVLNTVKRAQ ALFQHLKKHK PKCDLVLIHS
RFRAQDKAHA IEKLLSPVNE QGTICVTTQV IEAGVDVSSS TLITDLAPWA SLIQRFGRCN
RDGHENDAKI YWLGLDITKK GHSAPYKADE LLKATHILES LLNAKPSTLP APNNDPQYLH
VLRKKDLVDL FDTTPDIAGA DIDVSRFIRD VDDYSLQVFW RYLDGKEPSA LEPAPAKQEL
CNVPITSLQS APDLKKWRWD YLEKEWQRIW RNEELYPGLT ILLDTAAGGY SAELGWTGNK
NDVPAPLPTR EKPFEAHDDD TITSMGWQTL SDHVQAVVNE LDLLLDCLPL DDYESIEALK
LAARWHDSGK AHPVFQEAMV KNTTPPEQNK LWGKTFLGNV TYSRRGFRHE LASALAMIEN
GLPDLAVYLA AAHHGKLRLT IRSLPNETKP DQMEKRFAKG IWDGDVLPEA ELGNGTVMSE
TTLDLSVMEL GEGAKGPSWL SRTLKLRDSQ RLGPFKLAYL EALLRIADWR ASRNQDSSHA
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