| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dret_1611 |
|---|
| Symbol | |
|---|
| ID | 8419442 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfohalobium retbaense DSM 5692 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013223 |
|---|
| Strand | + |
|---|
| Start bp | 1859240 |
|---|
| End bp | 1859464 |
|---|
| Gene Length | 225 bp |
|---|
| Protein Length | 74 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 56% |
|---|
| IMG OID | 645038185 |
|---|
| Product | phage transcriptional regulator, AlpA |
|---|
| Protein accession | YP_003198473 |
|---|
| Protein GI | 258405731 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG3311] Predicted transcriptional regulator |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 0.0193561 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 23 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCGGAAAA CTGGCAACAA GTTGCTGCGC CTAAAAGACG TCCTCGACCG CGTTCCCGTG
GGCAGAACAA GCTGGTGGAA CGGGGTCAAG AAGGGGATCT TCCCGCAACC AATTAAACTC
GGGCCGCGGA CCACATGCTG GCGCGAAGAG GACATTGACG CCTTTATTGA GGGCCTGACC
AGCGCAGAAG AGAAATCTCA AGACCAAAAG GGGGTGCTCC AATGA
|
|---|
| Protein sequence | MRKTGNKLLR LKDVLDRVPV GRTSWWNGVK KGIFPQPIKL GPRTTCWREE DIDAFIEGLT
SAEEKSQDQK GVLQ
|
|---|
| |