| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dret_1610 |
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| Symbol | |
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| ID | 8419441 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfohalobium retbaense DSM 5692 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013223 |
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| Strand | + |
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| Start bp | 1857181 |
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| End bp | 1858365 |
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| Gene Length | 1185 bp |
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| Protein Length | 394 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 645038184 |
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| Product | integrase family protein |
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| Protein accession | YP_003198472 |
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| Protein GI | 258405730 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0582] Integrase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.0939795 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 0.722179 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCGCTCA CCGTCAAAGC CATCCAGGCC GCTAAGCCTC GAGAAAAACT CTATCGTTTG
AATGACGAAC GAGGGCTCTA TCTCGAGATC CCACCGAAAG GCGCTTACCG CTGGCGCTTT
CGCTACCGAT TTCATGGCAA ACCCAAAATG GTCAGCTTGG GCCGCTACCC AGATATCAGC
CTCAAACAAG CAAGGGAAAA ACGCGACGAG ATGCGCGCCC TTGTTGCTTC CTCCATCGAC
CCCTCGAATT ATCTCCGCCA AGCACGACAC GCTGCTAAAG ATGACAGCTT TGAGGCGGTC
GCCAGGGAAT GGCACAAAAA ATTCAAAAGC CGGTGGACAG AGGGCCATGC AGCCACTGTC
CTCACCCGGC TCGAACAAAA TGCTTTTCCC TGGATAGGCT CTCAGCCGAT AGATTCCGTT
ACCCCCCTCG ATATACTTCC TCTTTTGCGT CGCATAGAGG ATCGCGGCGC TATCGAACTT
GCCCACCGGG TGCGCGGGAT TATTAGTCAA GTCTTCCGAT TTGCAGTGGC CAACGAAAGA
GCCAGCCGCG ACCCGGCAAG CGACCTGAGA GACGCCCTGA CACCTCGCCA AGAAAATCAC
TTCGCGGCTA TCACCAACCC CTCTGAGATC CCAGCCCTAC TGGGCGCTAT CAGCGAATAC
CAAGGGCATT TTGTCACACG TTGCGCCCTC AGGCTGGCCT CCCTTGTTTT TGTCCGCCCC
GGCGAATTAC GCAAAGCAGA ATGGGACGAA ATTGATCTCG CCCACCAAGA GTGGCGCCTG
CCACCCGCCA AAACCAAACT TCGCAAGACG CACATCATCC CTCTTGCGCA TCAAGCTTGC
GCAATCTTTA ACGAAATCCA CCCGCTCACA GGCACAGGTC GTTACGTCTT CCCCTCTGCG
AGAGATAAAA ACAAGCCCAT GTCGGAAAAC ACCATCAATG CCGCACTACG ACAACTTGGA
TTCTCCAAAG AGAAAATGAC CGCTCACGGT TTCAGATCGA TGGCCTCGAC ACGCCTAAAC
GAACTAGGTT GGCATCCGGA TGCAATCGAG CGCCAACTGG GACATACCGA AAAAAACGGA
GTGCGTGCAG CATATAACCA CGCAGAATAC CTGGAAGAAC GCCGCAAAAT GATGCAGGCC
TGGGCTGACT ATCTCGATAA ACTCACCAAT AAAGATCTTC TTTAA
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| Protein sequence | MALTVKAIQA AKPREKLYRL NDERGLYLEI PPKGAYRWRF RYRFHGKPKM VSLGRYPDIS
LKQAREKRDE MRALVASSID PSNYLRQARH AAKDDSFEAV AREWHKKFKS RWTEGHAATV
LTRLEQNAFP WIGSQPIDSV TPLDILPLLR RIEDRGAIEL AHRVRGIISQ VFRFAVANER
ASRDPASDLR DALTPRQENH FAAITNPSEI PALLGAISEY QGHFVTRCAL RLASLVFVRP
GELRKAEWDE IDLAHQEWRL PPAKTKLRKT HIIPLAHQAC AIFNEIHPLT GTGRYVFPSA
RDKNKPMSEN TINAALRQLG FSKEKMTAHG FRSMASTRLN ELGWHPDAIE RQLGHTEKNG
VRAAYNHAEY LEERRKMMQA WADYLDKLTN KDLL
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