| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dret_1602 |
|---|
| Symbol | |
|---|
| ID | 8419432 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfohalobium retbaense DSM 5692 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013223 |
|---|
| Strand | - |
|---|
| Start bp | 1850493 |
|---|
| End bp | 1851221 |
|---|
| Gene Length | 729 bp |
|---|
| Protein Length | 242 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 645038175 |
|---|
| Product | ABC transporter related |
|---|
| Protein accession | YP_003198464 |
|---|
| Protein GI | 258405722 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG1137] ABC-type (unclassified) transport system, ATPase component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 22 |
|---|
| Fosmid unclonability p-value | 0.752612 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCAGACAG CGGAAATTGA GGCCCGTGAC CTTTGCAAGC GGTTCGGGCA GCGCCAGGTC
GTGCGGGATA TCTCCCTGCG TCTGGATCAG GGCGAGGTCG TCGGTCTGCT CGGGCCCAAC
GGGGCCGGCA AGACCACGAC CTTCTATATG CTGGTCGGGA TCATTAAGCC CACCCAGGGG
CAGGTTTTTG TCAACGGCCG GGAAACGACC CAATGGCCCC TGCACGATCG AGCCCGGCAC
GGCGTGAGTT ATTTGCCCCA GGAATCCTCT GTGTTCCGGA AGCTCACGGT GCGGCAGAAT
CTGGAAATCA TTCTGGAATA CAGCTGTTCC AGCCGCAAGG AGGCCCGCGA CGAAGCTGAT
CGTCTGCTCC AGGAACTCGG GATCGCCAAA CTCGCCGATC AGAAGGCGAT GCACCTTTCC
GGCGGCGAGC GCCGCCGCCT GGAGATCGCC CGGGCGCTGA TCCGCAAGCC GACATTCATG
CTCCTGGACG AGCCCTTTGC CGGCATCGAT CCCCTGGCTG TCGACGATAT CCAGCAGATT
GTGGCCGGTC TCAAGAACCG GGGGATCGGG GTCTTGATTT CCGATCACAA TGTCCGGGAG
ACGCTGCGAA TCTGTGACCG GGCCTATCTG GTCTACGAAG GCCAGATCAT CCTTGACGGC
ACTCCGGAGA CCATTGTTGC CGATGCCAAG GCGAGGCAGG TCTATCTCGG CGAAAAATTT
GAATTATAG
|
|---|
| Protein sequence | MQTAEIEARD LCKRFGQRQV VRDISLRLDQ GEVVGLLGPN GAGKTTTFYM LVGIIKPTQG
QVFVNGRETT QWPLHDRARH GVSYLPQESS VFRKLTVRQN LEIILEYSCS SRKEARDEAD
RLLQELGIAK LADQKAMHLS GGERRRLEIA RALIRKPTFM LLDEPFAGID PLAVDDIQQI
VAGLKNRGIG VLISDHNVRE TLRICDRAYL VYEGQIILDG TPETIVADAK ARQVYLGEKF
EL
|
|---|
| |