| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dret_1585 |
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| Symbol | |
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| ID | 8419415 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfohalobium retbaense DSM 5692 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013223 |
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| Strand | - |
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| Start bp | 1835774 |
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| End bp | 1837087 |
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| Gene Length | 1314 bp |
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| Protein Length | 437 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 645038158 |
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| Product | WD40 domain protein beta Propeller |
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| Protein accession | YP_003198447 |
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| Protein GI | 258405705 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0823] Periplasmic component of the Tol biopolymer transport system |
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| TIGRFAM ID | [TIGR02800] tol-pal system beta propeller repeat protein TolB |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 0.637887 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGCGTTCCA TTTACCTGGT CATAATTGCC TGCCTGCTGT GCCTCTGTGC CTTCCCGGCC
CAGGCCCAGC AGCAAATCGA GATCGATATT TACGGGCCCG GTCAGCAGCA ACTCAATATG
TACACCGCAC CCGTGGCCGC TCTGAGCGGA CCGGCTCCCG GGCAGCCAGC GGAAGCCTTG
CGACAAACCA TTTTGGACAA TCTCGGGTTT TTGCCGTTTC TGGCCCAGAC GGAAAGCAGT
GATGTGCTGG GCGGTACCGG CCTCAAGGGA GTCCGCAAGA AGGACATCGA CTTTAAACGG
TTTCGCTTGG CCCGTGTGGA TTTGCTCTTG TCCATCGGCT GGAAGCCCCA GTCGGGTGGC
CTCGGCTTGG TAGAACTGCG ACTTTTCGAT GTTTTCAGCC AACGGTTGAT GCTCGGCAAG
GGCTACAGAA TCATGGATCA GGAGCAGGTG GATGTCGTGG CCGACCGGTT CTGCGCTGAG
ATCGTGGACA CGCTGGCCGG CAACGGCGAT GTCTTCCGCT CGCGTCTGGC CTTTGTCCGG
CAAAACAGCA CGGCGAAAAA CATCTGGACC GTCGGTGTGC AGGGACGGGA TCCCAAACAG
ATCACCCGCC TCGAGGGAGT GAGCATGAGT CCGGCCTGGT CCTGGGACGG CCGGCGCATG
GCCTTTACCT ATCTCGATGA GCGCCGCCAC CGTCTTGGTC TATGGGACCG GGACGCCGGC
CAGATCAAAG CCATGGTCCT GCCTGGTAAC ACTTTGATCA GTCCGGTTTT TTCTCCCCAG
GGGCAGGTTG TTCTCAGTCT GGACCCTTAC GGGAATCCGG ACATCTTCAC CCTGAGCGAT
GACTGGACCA TCGAATCGCC CCTGGTGCGG CATTGGGGTA TCGACATTTC CCCCCAATTT
GACGAAAAGG GTGAGAAGAT GGTCTTTGTC TCCAGCCGGC TGGGCAATCC GCACATCTTT
GTCCGGGACA TGGACAGCGG TGAGGTGGAG CGGGTCAGTT TCGAGGGGAC CTACAACACG
AGTCCGACGA TCAGTCCGGA CGGCCGTTTT GTGGCCTATT CGCGGCGCAC CGACGATGGA
CACCGCATTG TCGTCCACGA CCTCGAATCT GGTGCCAGCC GCCAGATCAC GAAGGGGCCG
GGCAATGACG AAGATCCGAC TTGGGCGCCG GACGGCTATT TCCTGGCCTT TAGTTCGAAC
CGTAGCGGGA CCTATAAACT GTATCTGACC ACCCGCAACG GGGATACGCC CAAACAGATT
CCCACTGGTC CCGGCGCCGC GACTGCTCCT GCCTGGGGCC CGCCCATGCC CTGA
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| Protein sequence | MRSIYLVIIA CLLCLCAFPA QAQQQIEIDI YGPGQQQLNM YTAPVAALSG PAPGQPAEAL
RQTILDNLGF LPFLAQTESS DVLGGTGLKG VRKKDIDFKR FRLARVDLLL SIGWKPQSGG
LGLVELRLFD VFSQRLMLGK GYRIMDQEQV DVVADRFCAE IVDTLAGNGD VFRSRLAFVR
QNSTAKNIWT VGVQGRDPKQ ITRLEGVSMS PAWSWDGRRM AFTYLDERRH RLGLWDRDAG
QIKAMVLPGN TLISPVFSPQ GQVVLSLDPY GNPDIFTLSD DWTIESPLVR HWGIDISPQF
DEKGEKMVFV SSRLGNPHIF VRDMDSGEVE RVSFEGTYNT SPTISPDGRF VAYSRRTDDG
HRIVVHDLES GASRQITKGP GNDEDPTWAP DGYFLAFSSN RSGTYKLYLT TRNGDTPKQI
PTGPGAATAP AWGPPMP
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