| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dret_1584 |
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| Symbol | |
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| ID | 8419414 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfohalobium retbaense DSM 5692 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013223 |
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| Strand | - |
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| Start bp | 1834783 |
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| End bp | 1835382 |
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| Gene Length | 600 bp |
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| Protein Length | 199 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 645038157 |
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| Product | peptidoglycan-associated lipoprotein |
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| Protein accession | YP_003198446 |
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| Protein GI | 258405704 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG2885] Outer membrane protein and related peptidoglycan-associated (lipo)proteins |
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| TIGRFAM ID | [TIGR02802] peptidoglycan-associated lipoprotein |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 0.904402 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGACAAAC GGATGATGTG GGGAGTGCTT GTTTTTACGG TCGCGCTGCT GTTGAGCGCA
GGTTGCGCCA AAAAACAACT CGACACCCAA GCCGGTGAGA TGGGCGGTAC CGAAACGACC
ATGCAGGACA GCCAGGACAT GGGGCCTGAC GGCACCGGTC AGGACGGGAT GGACATGGAG
ACCAGCGTGT CTGAGGAACC CAAGGACGTG GATGAGTGGG AGGCCAAGGA ATCTTCCGGC
GCGGCTGAAG AGGAGAAGGC CTTGTCGAAT CTGCGTGAGG AAATCTATTT TGATTTCGAC
TCCTTTGAAC TCAAGCCCGA CGCCCGCGAC GTGCTTCAGG ACAAGGCTGC CCTTCTGGAC
GACAATCCCG GCTACAAAAT GATTATCGAA GGCCATTGCG ACGAGCGCGG TACCCAGGAA
TACAACCTGG CCCTTGGCGA ACGGCGCGCC CGCGCGGCCT ATGAATTTTT GATCCTGCTC
GGCATCGATG CCAATCGGCT GCAGATCGTG AGCTATGGCG AAGAACGCCC GGCCGTAGAA
GGCAGCAACG AAGCCGCCTG GGCGAAAAAC CGCCGCTGCG AATTCAAGAT TTACGAATAA
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| Protein sequence | MDKRMMWGVL VFTVALLLSA GCAKKQLDTQ AGEMGGTETT MQDSQDMGPD GTGQDGMDME
TSVSEEPKDV DEWEAKESSG AAEEEKALSN LREEIYFDFD SFELKPDARD VLQDKAALLD
DNPGYKMIIE GHCDERGTQE YNLALGERRA RAAYEFLILL GIDANRLQIV SYGEERPAVE
GSNEAAWAKN RRCEFKIYE
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