Gene Dret_1554 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDret_1554 
Symbol 
ID8419384 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfohalobium retbaense DSM 5692 
KingdomBacteria 
Replicon accessionNC_013223 
Strand
Start bp1797287 
End bp1798096 
Gene Length810 bp 
Protein Length269 aa 
Translation table11 
GC content63% 
IMG OID645038127 
Productinositol monophosphatase 
Protein accessionYP_003198416 
Protein GI258405674 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0483] Archaeal fructose-1,6-bisphosphatase and related enzymes of inositol monophosphatase family 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.475053 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value0.933362 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCATTCC AGCGCAATCA GGTCGATGAG TTGTCCAGCA AAGGTGAGGC CATTGTCCGC 
CGGGCCGGAG AGATTGTCCA CAAGCATTGG GACCGGCCCA AAAATGTCCA GTACAAGGGC
CGCATCGATC TCGTGACTGA GACCGACACC GCGGTTGAGG ACTACCTGAC CCGGGAACTC
TCGCTGCTTT TGCCCAAGGC GCGCATTGTG GCTGAAGAAA GCGCTGCTGA CGTTGATCCC
GGGGATTTGG CCTGGATCAT CGATCCTCTG GACGGAACGA CGAATTTTGC CCACGGCCTG
CCCCATGTGG CCGTGTCTGT GGGGCTCTGG GGCAAGGGGC GGATGATCAT GGGCTTTATC
CATGTCCCGA AGCTCAACGA ATTTTTTTCC GCTGTGCGCG GCCGGGGGGC CTTTTTGAAC
GGCCGCCCGA TCACGGTTGC TGACGCGGCG CGTCTGGATG CGACGGTGGT TGCCACCGGT
TTTCCCTACA GTGTGGCTGA GGATCTGGAG CAGATTCTTC CGCCGCTGGG GCGGGTGCTG
GAAGCGACCC GGGGCATCCG CCGCCTCGGC GCCGCGGCTG TGGACCTGGC CTACACCGCC
TGCGGCCGGT TTGGCGGCTT CTACGAATAC GGGCTCAAAC CGTGGGATAC TGCGGCTGGC
TGGCTTTTGG TCGAAGAGGC CGGCGGCAAG GTGACCCGCA CGGACGGCAC GACCCCGTAT
GGGTTCGACA GTCCCGGCAT CCTGGCCACG AACGGCACCC TCCACGCGGC GCTGGCTGAA
GCGGTAGAAG GGGAAGTGTT GGGGAAATGA
 
Protein sequence
MPFQRNQVDE LSSKGEAIVR RAGEIVHKHW DRPKNVQYKG RIDLVTETDT AVEDYLTREL 
SLLLPKARIV AEESAADVDP GDLAWIIDPL DGTTNFAHGL PHVAVSVGLW GKGRMIMGFI
HVPKLNEFFS AVRGRGAFLN GRPITVADAA RLDATVVATG FPYSVAEDLE QILPPLGRVL
EATRGIRRLG AAAVDLAYTA CGRFGGFYEY GLKPWDTAAG WLLVEEAGGK VTRTDGTTPY
GFDSPGILAT NGTLHAALAE AVEGEVLGK