Gene Dret_1488 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDret_1488 
Symbol 
ID8419317 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfohalobium retbaense DSM 5692 
KingdomBacteria 
Replicon accessionNC_013223 
Strand
Start bp1719981 
End bp1720844 
Gene Length864 bp 
Protein Length287 aa 
Translation table11 
GC content62% 
IMG OID645038062 
ProductNitrilase/cyanide hydratase and apolipoprotein N- acyltransferase 
Protein accessionYP_003198352 
Protein GI258405610 
COG category[R] General function prediction only 
COG ID[COG0388] Predicted amidohydrolase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value1.88425e-06 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value3.21819e-11 
Fosmid HitchhikerNo 
Fosmid clonabilityunclonable 
 

Sequence

Gene sequence
ATGTCCACAC CCCTTCACGT CGGGCTGATC CAGATGGAAA TCAGCCCTGA GACGCAGACC 
AATATCGATA CCCTCGAAGC CAAGGCCGAA GCCCTGTGCA ACGACCCGCG TCGCCCGCAG
CTGATCATCG GCGTCGAGTT CGGCATCGCC CCGCACCATA TCGAAGATCC TGAGGGACCG
GCCATGCAGC GTCTCTCCCG GCTCGCTGCC CGGCTCGGGG TCTGGCTGGT GCCGGGGAGT
CTGAAACTGG CCGAACCCGG TGGCGGCTTC AGTAACGCCG CACCGGTCTT CGCCCCAGAC
GGCCGACTCG CTGGGACCTA CAAGAAAATG GTCCCCTGGG ACACTGATTT GGAAAAAGGC
ACCCTGCCGG GCCGGGACTA TCTCGTTTTT GACATCGAAA AACCCCAGGT CCGCTTCGGC
CTGCAGATCT GCTTCGACGC CGACTTTCCG GAAATAAGCC GCACCCTGAC CCTCATGGGC
GCCGAGGTCC TCATCCAGCT CTCAATGGAT CCCGACAGCA TTCCGGACAG CTACCAGCAC
ATCAAATACG CCCGGGCCAT CGAAAACCAG GCCTACTATA TCTACATGAA CGGGGCCTGC
GACTACGGCC ACTACCACCT TGCCGGCGGT TCCCTGGTGG TCTCTCCCGA GGGGCAACGG
ATCTTCGAGG CCGGTGAGCG ACCCACTGCG ACCATCGTCA GTCTGGATCT GGACCGCCTG
CGGCATTGCC GTGCAGCCGG CAGTTGGGAC CAAGTCGCCC AACTCCAGGC CCTGTATGAC
CACGCACCGT CCCAGCCACT GGCTGGCAAC GAACAGGCCG GAGCCCTGTT CCAGCGCCCT
CCGTTTGGCG GAACACAAAA ATAA
 
Protein sequence
MSTPLHVGLI QMEISPETQT NIDTLEAKAE ALCNDPRRPQ LIIGVEFGIA PHHIEDPEGP 
AMQRLSRLAA RLGVWLVPGS LKLAEPGGGF SNAAPVFAPD GRLAGTYKKM VPWDTDLEKG
TLPGRDYLVF DIEKPQVRFG LQICFDADFP EISRTLTLMG AEVLIQLSMD PDSIPDSYQH
IKYARAIENQ AYYIYMNGAC DYGHYHLAGG SLVVSPEGQR IFEAGERPTA TIVSLDLDRL
RHCRAAGSWD QVAQLQALYD HAPSQPLAGN EQAGALFQRP PFGGTQK