| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dret_1483 |
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| Symbol | |
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| ID | 8419312 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfohalobium retbaense DSM 5692 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013223 |
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| Strand | - |
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| Start bp | 1712127 |
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| End bp | 1713464 |
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| Gene Length | 1338 bp |
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| Protein Length | 445 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 645038057 |
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| Product | amino acid carrier protein |
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| Protein accession | YP_003198347 |
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| Protein GI | 258405605 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1115] Na+/alanine symporter |
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| TIGRFAM ID | [TIGR00835] amino acid carrier protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.511941 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 5 |
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| Fosmid unclonability p-value | 0.0000051081 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGGACGCAT TACTATCGTT TTTCAGCACG CTCAGCGGAT ATGTTTGGGG GCCGCCGTTG
CTGATCCTTC TGGTGGGCAC AGGGGCGTGG CTGACCCTGT GCTTGAGAGG CTTGCAATTT
TCGAAATTGT GGCACTCGCT GTATCTGGCG CTGATCAAAC GTAAGGAAGA GGGGGCTGAA
GAAGGGGACA TCAGCCACTT TCAGGCCCTG ATGACGGCCT TGTCCGCCAC TGTCGGGACC
GGGAATATCG CCGGTGTGGC TACAGCGGTG GCTATCGGCG GTCCCGGAGC GTTGTTCTGG
ATGTGGATCA CCGGTCTGGT CGGGATGGCC ACCAAGTATG CTGAGGCTGT CCTGGCGGTC
AAATACCGCA TTGTGGACGC TCGCGGCCAG ATGAGCGGTG GTCCCATGTA CTATATCGAG
CGCGGCCTGG GCTGGAAATG GCTCGGTGTT TTGTTCGCCC TGTTTGCGGC CGTGGCAGCG
TTCGGTATTG GCAACATGGT CCAGTCCAAC TCTATGGCCG ATGCCTTGAA TTCGACCTTC
CAGGTCCCCC ACATAGCCAC CGGTATCGTG CTCATGCTCG CCACCGCGGC TGTTATTCTG
GGCGGGATCA AGAGTATCGC CCGGGTGACA TCGGTCCTGG TGCCGATCAT GGTTGTTTTC
TATATGGGCG GAGCGCTGTT GATTATTCTG CTCAATGTGG CCCAGGTGCC GGCGGCCTTC
GCGCTGATTT TCAAGCACGC CCTGAGCCCG ACCGCGACAA CCGGCGGTTT TGTCGGTGCC
TCGATCATGC TGACCATCCG CATGGGTGTG GCCCGCGGTG TGTTCTCCAA TGAATCCGGT
CTCGGCAGCG CCCCTATCGC GGCTGCGGCG GCCCAGACCA AACACCCCGT AACCCAGGCC
CTGGTGTCGA TGACCCAAAC TTTTATCGAT ACCATTATCG TGTGTACCAT GACTGGACTG
GTTCTGGTCA TTACCGGATT GTGGTCCAGC GGTGAAAACG GTGCGGCCCT GACGAGCCAG
GCCTTTGGCG CTGGAATGCC GGGCGGGGAG CTGATCGTCA CCCTCGGCCT GATCCTTTTT
GCCTACTCCA CCATCCTGGG CTGGTGCTAC TACGGCGAAA AATCGATTGA ATACCTGCTG
GGGGAAAAAT CCATTGTACC CTATCGGGTG CTGTTCGTTA TTTTCGTCGG TGTGGGCGCG
GTTCTCAAGC TCGATCTGGT CTGGGCCCTG GCCGATGTCT TCAACGGACT GATGGCCTTC
CCCAACCTGA TCGCTCTGTT GGTCCTGACA CCGGTTATTG TCAAAGAGAC CCGGAATTAT
TTTAACAATA AGAAATAG
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| Protein sequence | MDALLSFFST LSGYVWGPPL LILLVGTGAW LTLCLRGLQF SKLWHSLYLA LIKRKEEGAE
EGDISHFQAL MTALSATVGT GNIAGVATAV AIGGPGALFW MWITGLVGMA TKYAEAVLAV
KYRIVDARGQ MSGGPMYYIE RGLGWKWLGV LFALFAAVAA FGIGNMVQSN SMADALNSTF
QVPHIATGIV LMLATAAVIL GGIKSIARVT SVLVPIMVVF YMGGALLIIL LNVAQVPAAF
ALIFKHALSP TATTGGFVGA SIMLTIRMGV ARGVFSNESG LGSAPIAAAA AQTKHPVTQA
LVSMTQTFID TIIVCTMTGL VLVITGLWSS GENGAALTSQ AFGAGMPGGE LIVTLGLILF
AYSTILGWCY YGEKSIEYLL GEKSIVPYRV LFVIFVGVGA VLKLDLVWAL ADVFNGLMAF
PNLIALLVLT PVIVKETRNY FNNKK
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