| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dret_1462 |
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| Symbol | |
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| ID | 8419291 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfohalobium retbaense DSM 5692 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013223 |
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| Strand | - |
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| Start bp | 1691207 |
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| End bp | 1692361 |
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| Gene Length | 1155 bp |
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| Protein Length | 384 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 645038037 |
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| Product | geranylgeranyl reductase |
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| Protein accession | YP_003198327 |
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| Protein GI | 258405585 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0644] Dehydrogenases (flavoproteins) |
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| TIGRFAM ID | [TIGR02032] geranylgeranyl reductase family |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.36043 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 0.122675 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCACCGTT TTGACGCGAT AGTGGTTGGG GGTGGTCCGA GCGGGTGTGC GGCCGCCAAA
GGGATAGCTG ACGCAGGCGG GGAAGTGCTG CTTCTGGATA AGGCGGCCTT TCCGCGTCCG
AAGTTGTGTG CCGGGGTGAT CACCGCCAAA ACAGTGGCGG TTGTAGAGCG CGTTTTCGGG
CTCGACACGG CGAGTCTGCA TGCCTGCGGA GCATTGAAGG CAGCGACGCC GCGATATAGG
GTCGTTACCC GGCAGCGGGT CCTTTTGGAG GACAGCGCGC CGGACCCGTT TCGCCTTGTG
GAACGTCGTT CTTTTGATCA TCTGCTTTTG CAGCGCGCAG CGGCAGCGGG GGCGCGGTGT
GTGACCGAGA CTCCGGTTAC GGGAATTGAT CCCCGGCGGG GTGAGGTCAA AACAGCCGCC
GGAGAGACGT TCCAGGCCAG GGTCGTTATC GGCGCTGACG GCGTGCATAG CCGGGTGCGG
CGTCACCTCA CCCCCCGGGT CCAGGCCCGG CGCTATTGGC GGCAACGGCT GGCCCATTGC
GTGGAGATTG TCGCTCCCCT GCAGGATTTG ACCCATTCCC ACACCAGCCT CGGGCTGCAC
CTGGGGTACG TCCGTCACGG CTATGCCTGG AATTTTCCAC GCGGCGAGGA TATTATTCTC
GGCATGTGCG CCTTGCCCTG CCGCGGGGAA CGGCTGGATC ACGCCTTTCA GGAATTTCTC
GGTGATATCG GCTATGTGGG GGCGGCCCCG TTCAAAGGAC ACCCGCTGCC GTACGGCAAT
TTTTTGGACA CCCCTGTTCA GGATCGGGTC CTCTTGACTG GAGACGCGGC CGGCCTGGCC
GACCCGCTGC TCGGCGAGGG ATTGTATTTT GCCCTGCGCA GCGGCGAACT CGCCGCACAG
GCCGCTTTGT CCCCCGAACA CGGTTTTTTT GCCTATGACA AGGCCCTGCA TTCGGAGATT
TACAGCGATT TCTGCTGGGC GCAACGGTTG CGCCGCACCG CTTTATTTCT GCTCCCGGTG
GCTTCGGGAC GCCTTGTGGC CGGACTGGCG CAGTGGGCCA GGCGCCCTTT GGAAGAAATG
GTTCACGGCT ACCGGCGGTA TTCCGGACGC CGGGTTGGCG CCCAGGGGTT CGGGGTGGCC
GAGTCCAAAC CGTGA
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| Protein sequence | MHRFDAIVVG GGPSGCAAAK GIADAGGEVL LLDKAAFPRP KLCAGVITAK TVAVVERVFG
LDTASLHACG ALKAATPRYR VVTRQRVLLE DSAPDPFRLV ERRSFDHLLL QRAAAAGARC
VTETPVTGID PRRGEVKTAA GETFQARVVI GADGVHSRVR RHLTPRVQAR RYWRQRLAHC
VEIVAPLQDL THSHTSLGLH LGYVRHGYAW NFPRGEDIIL GMCALPCRGE RLDHAFQEFL
GDIGYVGAAP FKGHPLPYGN FLDTPVQDRV LLTGDAAGLA DPLLGEGLYF ALRSGELAAQ
AALSPEHGFF AYDKALHSEI YSDFCWAQRL RRTALFLLPV ASGRLVAGLA QWARRPLEEM
VHGYRRYSGR RVGAQGFGVA ESKP
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