Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dret_1443 |
Symbol | |
ID | 8419272 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfohalobium retbaense DSM 5692 |
Kingdom | Bacteria |
Replicon accession | NC_013223 |
Strand | + |
Start bp | 1675194 |
End bp | 1675571 |
Gene Length | 378 bp |
Protein Length | 125 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 645038018 |
Product | translation initiation factor SUI1 |
Protein accession | YP_003198308 |
Protein GI | 258405566 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0023] Translation initiation factor 1 (eIF-1/SUI1) and related proteins |
TIGRFAM ID | [TIGR01158] translation initation factor SUI1, putative, prokaryotic |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.00199904 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 0.134693 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCACCTA AAAAACCACA CAATTCGCGC GCCGTCTACT CCACGGACGA TGGTCGCCTC TGCCCGCAAT GCGGTCAGTC GGCCGCCCGC TGCGTTTGTC ATAAAAACAA GAAAGGTAGT GCTGCCGCCA CGGAAAGCGA CGGCATTGTT CGCCTCAAGC GCGAAAGCAA GGGCCGCAAG GGCAAAGGGG TGACACTGAT CACCGGGGTA CCCCTTGAAG CAGAAGCCCT CAAGCAGTTG GCCAAGACCT TGAAACAAAA ATGCGGCACT GGCGGCACTG TGAAAAACGG CGTCATCGAA ATCCAGGGAG AGCACCGGGA CATATTGGCT CAGCAACTCC GCGCCCAGGG ATATACAGTG AAAATCGCCG GTGGCTGA
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Protein sequence | MAPKKPHNSR AVYSTDDGRL CPQCGQSAAR CVCHKNKKGS AAATESDGIV RLKRESKGRK GKGVTLITGV PLEAEALKQL AKTLKQKCGT GGTVKNGVIE IQGEHRDILA QQLRAQGYTV KIAGG
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