Gene Dret_1443 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDret_1443 
Symbol 
ID8419272 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfohalobium retbaense DSM 5692 
KingdomBacteria 
Replicon accessionNC_013223 
Strand
Start bp1675194 
End bp1675571 
Gene Length378 bp 
Protein Length125 aa 
Translation table11 
GC content57% 
IMG OID645038018 
Producttranslation initiation factor SUI1 
Protein accessionYP_003198308 
Protein GI258405566 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0023] Translation initiation factor 1 (eIF-1/SUI1) and related proteins 
TIGRFAM ID[TIGR01158] translation initation factor SUI1, putative, prokaryotic 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.00199904 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.134693 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCACCTA AAAAACCACA CAATTCGCGC GCCGTCTACT CCACGGACGA TGGTCGCCTC 
TGCCCGCAAT GCGGTCAGTC GGCCGCCCGC TGCGTTTGTC ATAAAAACAA GAAAGGTAGT
GCTGCCGCCA CGGAAAGCGA CGGCATTGTT CGCCTCAAGC GCGAAAGCAA GGGCCGCAAG
GGCAAAGGGG TGACACTGAT CACCGGGGTA CCCCTTGAAG CAGAAGCCCT CAAGCAGTTG
GCCAAGACCT TGAAACAAAA ATGCGGCACT GGCGGCACTG TGAAAAACGG CGTCATCGAA
ATCCAGGGAG AGCACCGGGA CATATTGGCT CAGCAACTCC GCGCCCAGGG ATATACAGTG
AAAATCGCCG GTGGCTGA
 
Protein sequence
MAPKKPHNSR AVYSTDDGRL CPQCGQSAAR CVCHKNKKGS AAATESDGIV RLKRESKGRK 
GKGVTLITGV PLEAEALKQL AKTLKQKCGT GGTVKNGVIE IQGEHRDILA QQLRAQGYTV
KIAGG