| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dret_1438 |
|---|
| Symbol | |
|---|
| ID | 8419267 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfohalobium retbaense DSM 5692 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013223 |
|---|
| Strand | + |
|---|
| Start bp | 1671123 |
|---|
| End bp | 1671479 |
|---|
| Gene Length | 357 bp |
|---|
| Protein Length | 118 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 645038013 |
|---|
| Product | response regulator receiver protein |
|---|
| Protein accession | YP_003198303 |
|---|
| Protein GI | 258405561 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 0.0726214 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 16 |
|---|
| Fosmid unclonability p-value | 0.0482802 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCTGGGC ATCTCCTGCT CATCGACGAT TCCGCCATTT CGCGCAAAAT GATCAAAGCC
AATCTCCCGC CGGGAGACTA CACCATCGCC GAGGCTGGAG GCGGCCGCGA GGGGCTGGAG
CAGTATCAGG CCCATCGGGC GGACCTGGTC CTGCTGGACC TGACCATGCC GGACATGGAC
GGGTTCGAAA CCCTGACCCG CCTCAAGGAG CTGGATCCTG AGGCCCGGGT GGTCATCCAG
TCGGCCGATG TCCAGGAGTC GTCCAGAGAA AAAGCCTTCG CCCTTGGGGC CGAGGATTTT
CTGATGAAAC CGCCAAAAGC CGATGCGTTG CGTCAACTCA TCGAGAGCTG CGTGTAG
|
|---|
| Protein sequence | MAGHLLLIDD SAISRKMIKA NLPPGDYTIA EAGGGREGLE QYQAHRADLV LLDLTMPDMD
GFETLTRLKE LDPEARVVIQ SADVQESSRE KAFALGAEDF LMKPPKADAL RQLIESCV
|
|---|
| |