Gene Dret_1398 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDret_1398 
Symbol 
ID8419227 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfohalobium retbaense DSM 5692 
KingdomBacteria 
Replicon accessionNC_013223 
Strand
Start bp1632571 
End bp1633494 
Gene Length924 bp 
Protein Length307 aa 
Translation table11 
GC content56% 
IMG OID645037973 
Productfructose-1,6-bisphosphate aldolase, class II 
Protein accessionYP_003198263 
Protein GI258405521 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0191] Fructose/tagatose bisphosphate aldolase 
TIGRFAM ID[TIGR01859] fructose-1,6-bisphosphate aldolase, class II, various bacterial and amitochondriate protist
[TIGR00167] ketose-bisphosphate aldolases 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.635947 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCACTTG TATCACCCAA AGAGATGTTC GCCAAAGCCT ATGCCGGTGG CTACGCCATT 
GGCGCTTTTA ACGTCAATAA CATGGAGATT ATCCAGGGCA TTATCAGCGC GGCCGAAACG
GAACGCTCGC CCCTTATTCT CCAGGTCTCG GCTGGCGCCC GTCGCTACGC CGGGCAGACC
TATATTCTGA AGCTCGTCGA GGCGGCTTTG GAAGAAAGCG ATTTGCCGAT CTGTCTGCAT
CTGGACCACG GTCAGGATTT TGATATCTGC AAGAAAGTTA TCGATGGCGG ATTTACCTCG
GTCATGATCG ATGGCTCGCA CCTGCCGTTT GAGGAGAATA TTGCCCTGAC CAAGGAAGTG
GTCGAATACG CCCATCCCCG TGGTGTCTGG GTCGAAGCCG AACTCGGCCA ATTGGCTGGC
GTCGAGGACG ACGTCCAGGC TGAAGAAAAT GTCTATACCA ATCCGGATGA GGCTGTTGAA
TTTGTTGAAC GCACCGGCTG CGACTCCCTG GCCATCGCCA TCGGCACGAG TCACGGAGCC
TATAAGTTCA GCGGCCAGCC CCGGCTGGAT CTTGAACGCC TGGAAACCAT CACCACCAAG
TTGCCCGAAT TTCCTCTGGT CCTGCACGGC GCTTCCACGG TCCTGCCGGA ATTGGTGGAT
ATGGCCAATT CCTATGGCGG TCAGATCGCC GGGGCCAAGG GAGTTCCGGA AGATCTTTTG
CGTCAGGCCG CCAAGTCCGG CGTGTGCAAG ATCAATATCG ACACCGACAT CCGTTTGGCC
ATGACAGCCA ATATTCGCAA GTTCCTGGCC GAAAATCCGG CGGAATTCGA TCCCCGGAAA
TACCTCAAAC CAGCGCGCCA GGCGGTACAG GACATGGTCC AGCACAAGAT CGAAACGGTT
CTCGGGTCGT CCAATACGTT ATAG
 
Protein sequence
MPLVSPKEMF AKAYAGGYAI GAFNVNNMEI IQGIISAAET ERSPLILQVS AGARRYAGQT 
YILKLVEAAL EESDLPICLH LDHGQDFDIC KKVIDGGFTS VMIDGSHLPF EENIALTKEV
VEYAHPRGVW VEAELGQLAG VEDDVQAEEN VYTNPDEAVE FVERTGCDSL AIAIGTSHGA
YKFSGQPRLD LERLETITTK LPEFPLVLHG ASTVLPELVD MANSYGGQIA GAKGVPEDLL
RQAAKSGVCK INIDTDIRLA MTANIRKFLA ENPAEFDPRK YLKPARQAVQ DMVQHKIETV
LGSSNTL