| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dret_1384 |
|---|
| Symbol | |
|---|
| ID | 8419213 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfohalobium retbaense DSM 5692 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013223 |
|---|
| Strand | + |
|---|
| Start bp | 1616734 |
|---|
| End bp | 1618425 |
|---|
| Gene Length | 1692 bp |
|---|
| Protein Length | 563 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 56% |
|---|
| IMG OID | 645037959 |
|---|
| Product | glutaminyl-tRNA synthetase |
|---|
| Protein accession | YP_003198249 |
|---|
| Protein GI | 258405507 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0008] Glutamyl- and glutaminyl-tRNA synthetases |
|---|
| TIGRFAM ID | [TIGR00440] glutaminyl-tRNA synthetase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 21 |
|---|
| Fosmid unclonability p-value | 0.559394 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGGCAATA CCGACATTCA GACCGGCACC AACTTCATCC GTCAAATTGT CGAAGAAGAC
ATACACAACG GCAAAAATCA GGGACAGGTG GTTACCCGTT TTCCTCCGGA ACCCAACGGG
TATTTACATA TCGGCCACGC AAAGTCCATC TGTCTCAACT TCGGGCTGGC CTATGATTTT
AACGGCACCT GCCACCTTCG CTTTGACGAC ACCAATCCGG TCAAGGAAGA GCAGCGCTAT
ATCGATTCCA TCCAGCAGGA CGTGCACTGG CTCGGATTCG ACTGGCAGGA CCACCTCTAC
TTTGCCTCAG ACTACTTTGA CCGCCTCTAC GAATTCGCGC TGTCCTTGAT CCAAATGGGT
AAGGCCTATG TCTGCAGCCT CAGTCCGGAG GAAATCCGCC AGTACCGAGG TACCTTGACC
GAGCCCGGCC AGGAAAGCCC GTATCGGGCA CGCACAGTGC AGGAGAATCT CGATCTCTTC
CAGCGCATGG CCGCAGGCGA ATTTGCGGAA GGGGAGCATG TTTTACGGGC CAAAATCGAT
ATGGCCTCCC CGAACCTGAA CATGCGCGAC CCGGTGATTT ACCGGATCAT GAACCAGGCC
CACCACCGCA CGGGTGACAC GTGGCACATC TATCCCACCT ATGATTTCGC CCACGGGCTT
TCCGATTCCA TTGAGGGCAT CACCCACTCC GTTTGCACCT TGGAATTTGA AGACCACCGA
CCACTGTATG ACTGGTTTTT AGATCAACTC GGCGTCCACC ACCCCCAGCA GATCGAATTC
GCTCGGCTCA ATCTCAATTA TACCGTTATG AGCAAACGGA AATTGTTGCA ACTCGTCGAA
CAGGAATACG TCGAAGGCTG GGATGATCCG CGGATGCCGA CCATCTCCGG ACTGCGCCGC
CGGGGATTTA CGCCGCGCTC TATCCGCGAC TTTTGTGAAC GTATCGGAGT GGCCAAGGCC
AACAGCATGG TCGACATGGC CCTTTTGGAA CATTGTTTGC GCGAAGATCT CAACAAGCGT
GCTCCGCGGG TTATGGTGGT CCTCGATCCG GTCAAAGTGG TCATCACCAA TTATCCTGAG
GACCAGGTCG AACACATGGA AGCGGAAAAC AACCCAGAAG ATCCGAGTAC GGGCTCACGC
CAACTGCCCT TTTCGCGGGA AATTTACATC GAACGCTCCG ATTTTCGCGA AGACCCGCCA
AAGAAATATT TCCGCCTGGC CCCCGGACGG GAAGTCCGCC TCAAGCACGC CTACTACATC
ACCTGCGACA AGGCGGTGTA CGATGACAAG ACCGGCGACC TGGTCGAACT CCATTGTACC
TACGACCCAG AGACCCGCGG GGGCTGGTCT GAAGACGGGC GTAAGGTCAA AGGCACTCTG
CACTGGGTCG ACGCCCAGCA GGCGGTCCCG GCTCAGGTCC GGTTGTACGA CAGACTGTTT
ACGGCGCCGG TACCCGGGTC CGGTGAAGGC AGGGAATTCC TGGACGACAT CAATCCTGAA
TCCTTGCGGG TTCTGGACAC ATGCCTCCTG GAACCGGGGC TGGAAAAGGC CGCCCCGGAA
ACCCATTTCC AATTTCTGCG CCACGGGTAT TATTGCGTGG ACCAGTCCAG CACTCCGGAC
ACCCCGGTCT TCAACAAGAC CGTCGCATTG CGCGACACCT GGGCCAAACT GGAAAAGAAA
GGCGGCAAAT AG
|
|---|
| Protein sequence | MGNTDIQTGT NFIRQIVEED IHNGKNQGQV VTRFPPEPNG YLHIGHAKSI CLNFGLAYDF
NGTCHLRFDD TNPVKEEQRY IDSIQQDVHW LGFDWQDHLY FASDYFDRLY EFALSLIQMG
KAYVCSLSPE EIRQYRGTLT EPGQESPYRA RTVQENLDLF QRMAAGEFAE GEHVLRAKID
MASPNLNMRD PVIYRIMNQA HHRTGDTWHI YPTYDFAHGL SDSIEGITHS VCTLEFEDHR
PLYDWFLDQL GVHHPQQIEF ARLNLNYTVM SKRKLLQLVE QEYVEGWDDP RMPTISGLRR
RGFTPRSIRD FCERIGVAKA NSMVDMALLE HCLREDLNKR APRVMVVLDP VKVVITNYPE
DQVEHMEAEN NPEDPSTGSR QLPFSREIYI ERSDFREDPP KKYFRLAPGR EVRLKHAYYI
TCDKAVYDDK TGDLVELHCT YDPETRGGWS EDGRKVKGTL HWVDAQQAVP AQVRLYDRLF
TAPVPGSGEG REFLDDINPE SLRVLDTCLL EPGLEKAAPE THFQFLRHGY YCVDQSSTPD
TPVFNKTVAL RDTWAKLEKK GGK
|
|---|
| |